The occurrence of Nematoda in coastal sea ice on Svalbard (European Arctic) determined with the 18S small subunit rRNA gene

Abstract Understanding the diversity and functioning of Arctic sea ice ecosystems is vital to evaluate and predict the impact of current and future climate change. In the microscopic communities inhabiting the brine channels inside sea ice, nematodes often dominate numerically and act as bacterivore...

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Published in:Polar Biology
Main Authors: Pitusi, Vanessa, Søreide, Janne E., Hassett, Brandon T., Marquardt, Miriam, Andreasen, Magnus Heide
Format: Article in Journal/Newspaper
Language:English
Published: Springer Science and Business Media LLC 2021
Subjects:
Online Access:http://dx.doi.org/10.1007/s00300-021-02863-y
https://link.springer.com/content/pdf/10.1007/s00300-021-02863-y.pdf
https://link.springer.com/article/10.1007/s00300-021-02863-y/fulltext.html
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spelling crspringernat:10.1007/s00300-021-02863-y 2023-05-15T14:51:12+02:00 The occurrence of Nematoda in coastal sea ice on Svalbard (European Arctic) determined with the 18S small subunit rRNA gene Pitusi, Vanessa Søreide, Janne E. Hassett, Brandon T. Marquardt, Miriam Andreasen, Magnus Heide 2021 http://dx.doi.org/10.1007/s00300-021-02863-y https://link.springer.com/content/pdf/10.1007/s00300-021-02863-y.pdf https://link.springer.com/article/10.1007/s00300-021-02863-y/fulltext.html en eng Springer Science and Business Media LLC https://creativecommons.org/licenses/by/4.0 https://creativecommons.org/licenses/by/4.0 CC-BY Polar Biology volume 44, issue 6, page 1153-1162 ISSN 0722-4060 1432-2056 General Agricultural and Biological Sciences journal-article 2021 crspringernat https://doi.org/10.1007/s00300-021-02863-y 2022-01-04T14:27:06Z Abstract Understanding the diversity and functioning of Arctic sea ice ecosystems is vital to evaluate and predict the impact of current and future climate change. In the microscopic communities inhabiting the brine channels inside sea ice, nematodes often dominate numerically and act as bacterivores and herbivores. Despite nematodes great abundances and known ecological roles, molecular tools have not been applied to investigate their species diversity in sea ice. In an attempt to begin establishing a molecular baseline for species diversity of sea ice nematodes, we Sanger sequenced 74 specimens from four locations around Svalbard (European Arctic), using the 18S rRNA barcode. Currently available nucleotide reference databases are both underpopulated with representative marine nematode taxa and contain a substantial number of misidentified organisms. Together, these limitations inhibited the ability to identify marine specimens collected in this study with certainty. Nevertheless, our molecular data indicate the presence of two genera in sea ice on Svalbard— Theristus and Halomonhystera. While it is possible that the latter represents a novel ice nematode species, future studies, including morphometric analysis, are needed to verify our molecular findings. We leverage the assignment of molecular information to robustly identify nematodes and provide the first insight into the diversity of sea ice nematodes in the European Arctic. We advocate for an intensified cooperation between molecular and morphological taxonomists to expedite the establishment of baseline surveys that are required to predict biological consequences of the diminishing sea ice habitat in the future. Article in Journal/Newspaper Arctic Climate change Polar Biology Sea ice Svalbard Springer Nature (via Crossref) Arctic Svalbard Polar Biology 44 6 1153 1162
institution Open Polar
collection Springer Nature (via Crossref)
op_collection_id crspringernat
language English
topic General Agricultural and Biological Sciences
spellingShingle General Agricultural and Biological Sciences
Pitusi, Vanessa
Søreide, Janne E.
Hassett, Brandon T.
Marquardt, Miriam
Andreasen, Magnus Heide
The occurrence of Nematoda in coastal sea ice on Svalbard (European Arctic) determined with the 18S small subunit rRNA gene
topic_facet General Agricultural and Biological Sciences
description Abstract Understanding the diversity and functioning of Arctic sea ice ecosystems is vital to evaluate and predict the impact of current and future climate change. In the microscopic communities inhabiting the brine channels inside sea ice, nematodes often dominate numerically and act as bacterivores and herbivores. Despite nematodes great abundances and known ecological roles, molecular tools have not been applied to investigate their species diversity in sea ice. In an attempt to begin establishing a molecular baseline for species diversity of sea ice nematodes, we Sanger sequenced 74 specimens from four locations around Svalbard (European Arctic), using the 18S rRNA barcode. Currently available nucleotide reference databases are both underpopulated with representative marine nematode taxa and contain a substantial number of misidentified organisms. Together, these limitations inhibited the ability to identify marine specimens collected in this study with certainty. Nevertheless, our molecular data indicate the presence of two genera in sea ice on Svalbard— Theristus and Halomonhystera. While it is possible that the latter represents a novel ice nematode species, future studies, including morphometric analysis, are needed to verify our molecular findings. We leverage the assignment of molecular information to robustly identify nematodes and provide the first insight into the diversity of sea ice nematodes in the European Arctic. We advocate for an intensified cooperation between molecular and morphological taxonomists to expedite the establishment of baseline surveys that are required to predict biological consequences of the diminishing sea ice habitat in the future.
format Article in Journal/Newspaper
author Pitusi, Vanessa
Søreide, Janne E.
Hassett, Brandon T.
Marquardt, Miriam
Andreasen, Magnus Heide
author_facet Pitusi, Vanessa
Søreide, Janne E.
Hassett, Brandon T.
Marquardt, Miriam
Andreasen, Magnus Heide
author_sort Pitusi, Vanessa
title The occurrence of Nematoda in coastal sea ice on Svalbard (European Arctic) determined with the 18S small subunit rRNA gene
title_short The occurrence of Nematoda in coastal sea ice on Svalbard (European Arctic) determined with the 18S small subunit rRNA gene
title_full The occurrence of Nematoda in coastal sea ice on Svalbard (European Arctic) determined with the 18S small subunit rRNA gene
title_fullStr The occurrence of Nematoda in coastal sea ice on Svalbard (European Arctic) determined with the 18S small subunit rRNA gene
title_full_unstemmed The occurrence of Nematoda in coastal sea ice on Svalbard (European Arctic) determined with the 18S small subunit rRNA gene
title_sort occurrence of nematoda in coastal sea ice on svalbard (european arctic) determined with the 18s small subunit rrna gene
publisher Springer Science and Business Media LLC
publishDate 2021
url http://dx.doi.org/10.1007/s00300-021-02863-y
https://link.springer.com/content/pdf/10.1007/s00300-021-02863-y.pdf
https://link.springer.com/article/10.1007/s00300-021-02863-y/fulltext.html
geographic Arctic
Svalbard
geographic_facet Arctic
Svalbard
genre Arctic
Climate change
Polar Biology
Sea ice
Svalbard
genre_facet Arctic
Climate change
Polar Biology
Sea ice
Svalbard
op_source Polar Biology
volume 44, issue 6, page 1153-1162
ISSN 0722-4060 1432-2056
op_rights https://creativecommons.org/licenses/by/4.0
https://creativecommons.org/licenses/by/4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1007/s00300-021-02863-y
container_title Polar Biology
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container_issue 6
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