A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters

Marine microorganisms contribute to the health of the global ocean by supporting the marine food web and regulating biogeochemical cycles. Assessing marine microbial diversity is a crucial step towards understanding the global ocean. The waters surrounding Iceland are a complex environment where rel...

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Published in:PeerJ
Main Authors: Jégousse, Clara, Vannier, Pauline, Groben, René, Glöckner, Frank Oliver, Marteinsson, Viggó
Other Authors: Grant of Excellence, Icelandic Research Fund
Format: Article in Journal/Newspaper
Language:English
Published: PeerJ 2021
Subjects:
Online Access:http://dx.doi.org/10.7717/peerj.11112
https://peerj.com/articles/11112.pdf
https://peerj.com/articles/11112.xml
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spelling crpeerj:10.7717/peerj.11112 2024-06-23T07:54:01+00:00 A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters Jégousse, Clara Vannier, Pauline Groben, René Glöckner, Frank Oliver Marteinsson, Viggó Grant of Excellence Icelandic Research Fund 2021 http://dx.doi.org/10.7717/peerj.11112 https://peerj.com/articles/11112.pdf https://peerj.com/articles/11112.xml https://peerj.com/articles/11112.html en eng PeerJ https://creativecommons.org/licenses/by/4.0/ PeerJ volume 9, page e11112 ISSN 2167-8359 journal-article 2021 crpeerj https://doi.org/10.7717/peerj.11112 2024-06-11T04:28:38Z Marine microorganisms contribute to the health of the global ocean by supporting the marine food web and regulating biogeochemical cycles. Assessing marine microbial diversity is a crucial step towards understanding the global ocean. The waters surrounding Iceland are a complex environment where relatively warm salty waters from the Atlantic cool down and sink down to the deep. Microbial studies in this area have focused on photosynthetic micro- and nanoplankton mainly using microscopy and chlorophyll measurements. However, the diversity and function of the bacterial and archaeal picoplankton remains unknown. Here, we used a co-assembly approach supported by a marine mock community to reconstruct metagenome-assembled genomes (MAGs) from 31 metagenomes from the sea surface and seafloor of four oceanographic sampling stations sampled between 2015 and 2018. The resulting 219 MAGs include 191 bacterial, 26 archaeal and two eukaryotic MAGs to bridge the gap in our current knowledge of the global marine microbiome. Article in Journal/Newspaper Iceland PeerJ Publishing PeerJ 9 e11112
institution Open Polar
collection PeerJ Publishing
op_collection_id crpeerj
language English
description Marine microorganisms contribute to the health of the global ocean by supporting the marine food web and regulating biogeochemical cycles. Assessing marine microbial diversity is a crucial step towards understanding the global ocean. The waters surrounding Iceland are a complex environment where relatively warm salty waters from the Atlantic cool down and sink down to the deep. Microbial studies in this area have focused on photosynthetic micro- and nanoplankton mainly using microscopy and chlorophyll measurements. However, the diversity and function of the bacterial and archaeal picoplankton remains unknown. Here, we used a co-assembly approach supported by a marine mock community to reconstruct metagenome-assembled genomes (MAGs) from 31 metagenomes from the sea surface and seafloor of four oceanographic sampling stations sampled between 2015 and 2018. The resulting 219 MAGs include 191 bacterial, 26 archaeal and two eukaryotic MAGs to bridge the gap in our current knowledge of the global marine microbiome.
author2 Grant of Excellence
Icelandic Research Fund
format Article in Journal/Newspaper
author Jégousse, Clara
Vannier, Pauline
Groben, René
Glöckner, Frank Oliver
Marteinsson, Viggó
spellingShingle Jégousse, Clara
Vannier, Pauline
Groben, René
Glöckner, Frank Oliver
Marteinsson, Viggó
A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters
author_facet Jégousse, Clara
Vannier, Pauline
Groben, René
Glöckner, Frank Oliver
Marteinsson, Viggó
author_sort Jégousse, Clara
title A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters
title_short A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters
title_full A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters
title_fullStr A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters
title_full_unstemmed A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters
title_sort total of 219 metagenome-assembled genomes of microorganisms from icelandic marine waters
publisher PeerJ
publishDate 2021
url http://dx.doi.org/10.7717/peerj.11112
https://peerj.com/articles/11112.pdf
https://peerj.com/articles/11112.xml
https://peerj.com/articles/11112.html
genre Iceland
genre_facet Iceland
op_source PeerJ
volume 9, page e11112
ISSN 2167-8359
op_rights https://creativecommons.org/licenses/by/4.0/
op_doi https://doi.org/10.7717/peerj.11112
container_title PeerJ
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