A Microsatellite Genetic Map of the Turbot ( Scophthalmus maximus)
Abstract A consensus microsatellite-based linkage map of the turbot (Scophthalmus maximus) was constructed from two unrelated families. The mapping panel was derived from a gynogenetic family of 96 haploid embryos and a biparental diploid family of 85 full-sib progeny with known linkage phase. A tot...
Published in: | Genetics |
---|---|
Main Authors: | , , , , , , , , , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
Oxford University Press (OUP)
2007
|
Subjects: | |
Online Access: | http://dx.doi.org/10.1534/genetics.107.075416 https://academic.oup.com/genetics/article-pdf/177/4/2457/42189146/genetics2457.pdf |
id |
croxfordunivpr:10.1534/genetics.107.075416 |
---|---|
record_format |
openpolar |
spelling |
croxfordunivpr:10.1534/genetics.107.075416 2024-06-23T07:56:36+00:00 A Microsatellite Genetic Map of the Turbot ( Scophthalmus maximus) Bouza, Carmen Hermida, Miguel Pardo, Belén G Fernández, Carlos Fortes, Gloria G Castro, Jaime Sánchez, Laura Presa, Pablo Pérez, Montse Sanjuán, Andrés de Carlos, Alejandro Álvarez-Dios, José Antonio Ezcurra, Susana Cal, Rosa M Piferrer, Francesc Martínez, Paulino 2007 http://dx.doi.org/10.1534/genetics.107.075416 https://academic.oup.com/genetics/article-pdf/177/4/2457/42189146/genetics2457.pdf en eng Oxford University Press (OUP) https://academic.oup.com/journals/pages/open_access/funder_policies/chorus/standard_publication_model Genetics volume 177, issue 4, page 2457-2467 ISSN 1943-2631 journal-article 2007 croxfordunivpr https://doi.org/10.1534/genetics.107.075416 2024-06-11T04:18:55Z Abstract A consensus microsatellite-based linkage map of the turbot (Scophthalmus maximus) was constructed from two unrelated families. The mapping panel was derived from a gynogenetic family of 96 haploid embryos and a biparental diploid family of 85 full-sib progeny with known linkage phase. A total of 242 microsatellites were mapped in 26 linkage groups, six markers remaining unlinked. The consensus map length was 1343.2 cM, with an average distance between markers of 6.5 ± 0.5 cM. Similar length of female and male maps was evidenced. However, the mean recombination at common intervals throughout the genome revealed significant differences between sexes, ∼1.6 times higher in the female than in the male. The comparison of turbot microsatellite flanking sequences against the Tetraodon nigroviridis genome revealed 55 significant matches, with a mean length of 102 bp and high sequence similarity (81–100%). The comparative mapping revealed significant syntenic regions among fish species. This study represents the first linkage map in the turbot, one of the most important flatfish in European aquaculture. This map will be suitable for QTL identification of productive traits in this species and for further evolutionary studies in fish and vertebrate species. Article in Journal/Newspaper Scophthalmus maximus Turbot Oxford University Press Genetics 177 4 2457 2467 |
institution |
Open Polar |
collection |
Oxford University Press |
op_collection_id |
croxfordunivpr |
language |
English |
description |
Abstract A consensus microsatellite-based linkage map of the turbot (Scophthalmus maximus) was constructed from two unrelated families. The mapping panel was derived from a gynogenetic family of 96 haploid embryos and a biparental diploid family of 85 full-sib progeny with known linkage phase. A total of 242 microsatellites were mapped in 26 linkage groups, six markers remaining unlinked. The consensus map length was 1343.2 cM, with an average distance between markers of 6.5 ± 0.5 cM. Similar length of female and male maps was evidenced. However, the mean recombination at common intervals throughout the genome revealed significant differences between sexes, ∼1.6 times higher in the female than in the male. The comparison of turbot microsatellite flanking sequences against the Tetraodon nigroviridis genome revealed 55 significant matches, with a mean length of 102 bp and high sequence similarity (81–100%). The comparative mapping revealed significant syntenic regions among fish species. This study represents the first linkage map in the turbot, one of the most important flatfish in European aquaculture. This map will be suitable for QTL identification of productive traits in this species and for further evolutionary studies in fish and vertebrate species. |
format |
Article in Journal/Newspaper |
author |
Bouza, Carmen Hermida, Miguel Pardo, Belén G Fernández, Carlos Fortes, Gloria G Castro, Jaime Sánchez, Laura Presa, Pablo Pérez, Montse Sanjuán, Andrés de Carlos, Alejandro Álvarez-Dios, José Antonio Ezcurra, Susana Cal, Rosa M Piferrer, Francesc Martínez, Paulino |
spellingShingle |
Bouza, Carmen Hermida, Miguel Pardo, Belén G Fernández, Carlos Fortes, Gloria G Castro, Jaime Sánchez, Laura Presa, Pablo Pérez, Montse Sanjuán, Andrés de Carlos, Alejandro Álvarez-Dios, José Antonio Ezcurra, Susana Cal, Rosa M Piferrer, Francesc Martínez, Paulino A Microsatellite Genetic Map of the Turbot ( Scophthalmus maximus) |
author_facet |
Bouza, Carmen Hermida, Miguel Pardo, Belén G Fernández, Carlos Fortes, Gloria G Castro, Jaime Sánchez, Laura Presa, Pablo Pérez, Montse Sanjuán, Andrés de Carlos, Alejandro Álvarez-Dios, José Antonio Ezcurra, Susana Cal, Rosa M Piferrer, Francesc Martínez, Paulino |
author_sort |
Bouza, Carmen |
title |
A Microsatellite Genetic Map of the Turbot ( Scophthalmus maximus) |
title_short |
A Microsatellite Genetic Map of the Turbot ( Scophthalmus maximus) |
title_full |
A Microsatellite Genetic Map of the Turbot ( Scophthalmus maximus) |
title_fullStr |
A Microsatellite Genetic Map of the Turbot ( Scophthalmus maximus) |
title_full_unstemmed |
A Microsatellite Genetic Map of the Turbot ( Scophthalmus maximus) |
title_sort |
microsatellite genetic map of the turbot ( scophthalmus maximus) |
publisher |
Oxford University Press (OUP) |
publishDate |
2007 |
url |
http://dx.doi.org/10.1534/genetics.107.075416 https://academic.oup.com/genetics/article-pdf/177/4/2457/42189146/genetics2457.pdf |
genre |
Scophthalmus maximus Turbot |
genre_facet |
Scophthalmus maximus Turbot |
op_source |
Genetics volume 177, issue 4, page 2457-2467 ISSN 1943-2631 |
op_rights |
https://academic.oup.com/journals/pages/open_access/funder_policies/chorus/standard_publication_model |
op_doi |
https://doi.org/10.1534/genetics.107.075416 |
container_title |
Genetics |
container_volume |
177 |
container_issue |
4 |
container_start_page |
2457 |
op_container_end_page |
2467 |
_version_ |
1802649861218107392 |