Calling large indels in 1047 Arabidopsis with IndelEnsembler

• Published in: Nucleic Acids Research
• Main Authors: Liu, Dong-Xu, Rajaby, Ramesh, Wei, Lu-Lu, Zhang, Lei, Yang, Zhi-Quan, Yang, Qing-Yong, Sung, Wing-Kin
• Other Authors: National Key Research and Development Plan of China, National Natural Science Foundation of China, Fundamental Research Funds for the Central Universities
• Format: Article in Journal/Newspaper
• Language: English
• Published: Oxford University Press (OUP) 2021
• Subjects: North Sweden
• Online Access: http://dx.doi.org/10.1093/nar/gkab904; http://academic.oup.com/nar/article-pdf/49/19/10879/41070880/gkab904.pdf

Abstract Large indels greatly impact the observable phenotypes in different organisms including plants and human. Hence, extracting large indels with high precision and sensitivity is important. Here, we developed IndelEnsembler to detect large indels in 1047 Arabidopsis whole-genome sequencing data...