A Bivalve Biomineralization Toolbox

Abstract Mollusc shells are a result of the deposition of crystalline and amorphous calcite catalyzed by enzymes and shell matrix proteins (SMP). Developing a detailed understanding of bivalve mollusc biomineralization pathways is complicated not only by the multiplicity of shell forms and microstru...

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Published in:Molecular Biology and Evolution
Main Authors: Yarra, Tejaswi, Blaxter, Mark, Clark, Melody S
Other Authors: True, John, European Union Seventh Framework Programme, REA
Format: Article in Journal/Newspaper
Language:English
Published: Oxford University Press (OUP) 2021
Subjects:
Online Access:http://dx.doi.org/10.1093/molbev/msab153
http://academic.oup.com/mbe/advance-article-pdf/doi/10.1093/molbev/msab153/39310566/msab153.pdf
http://academic.oup.com/mbe/article-pdf/38/9/4043/39882203/msab153.pdf
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spelling croxfordunivpr:10.1093/molbev/msab153 2024-06-23T07:52:18+00:00 A Bivalve Biomineralization Toolbox Yarra, Tejaswi Blaxter, Mark Clark, Melody S True, John European Union Seventh Framework Programme REA 2021 http://dx.doi.org/10.1093/molbev/msab153 http://academic.oup.com/mbe/advance-article-pdf/doi/10.1093/molbev/msab153/39310566/msab153.pdf http://academic.oup.com/mbe/article-pdf/38/9/4043/39882203/msab153.pdf en eng Oxford University Press (OUP) http://creativecommons.org/licenses/by/4.0/ Molecular Biology and Evolution volume 38, issue 9, page 4043-4055 ISSN 1537-1719 journal-article 2021 croxfordunivpr https://doi.org/10.1093/molbev/msab153 2024-06-04T06:11:57Z Abstract Mollusc shells are a result of the deposition of crystalline and amorphous calcite catalyzed by enzymes and shell matrix proteins (SMP). Developing a detailed understanding of bivalve mollusc biomineralization pathways is complicated not only by the multiplicity of shell forms and microstructures in this class, but also by the evolution of associated proteins by domain co-option and domain shuffling. In spite of this, a minimal biomineralization toolbox comprising proteins and protein domains critical for shell production across species has been identified. Using a matched pair design to reduce experimental noise from inter-individual variation, combined with damage-repair experiments and a database of biomineralization SMPs derived from published works, proteins were identified that are likely to be involved in shell calcification. Eighteen new, shared proteins likely to be involved in the processes related to the calcification of shells were identified by the analysis of genes expressed during repair in Crassostrea gigas, Mytilus edulis, and Pecten maximus. Genes involved in ion transport were also identified as potentially involved in calcification either via the maintenance of cell acid–base balance or transport of critical ions to the extrapallial space, the site of shell assembly. These data expand the number of candidate biomineralization proteins in bivalve molluscs for future functional studies and define a minimal functional protein domain set required to produce solid microstructures from soluble calcium carbonate. This is important for understanding molluscan shell evolution, the likely impacts of environmental change on biomineralization processes, materials science, and biomimicry research. Article in Journal/Newspaper Crassostrea gigas Oxford University Press Molecular Biology and Evolution
institution Open Polar
collection Oxford University Press
op_collection_id croxfordunivpr
language English
description Abstract Mollusc shells are a result of the deposition of crystalline and amorphous calcite catalyzed by enzymes and shell matrix proteins (SMP). Developing a detailed understanding of bivalve mollusc biomineralization pathways is complicated not only by the multiplicity of shell forms and microstructures in this class, but also by the evolution of associated proteins by domain co-option and domain shuffling. In spite of this, a minimal biomineralization toolbox comprising proteins and protein domains critical for shell production across species has been identified. Using a matched pair design to reduce experimental noise from inter-individual variation, combined with damage-repair experiments and a database of biomineralization SMPs derived from published works, proteins were identified that are likely to be involved in shell calcification. Eighteen new, shared proteins likely to be involved in the processes related to the calcification of shells were identified by the analysis of genes expressed during repair in Crassostrea gigas, Mytilus edulis, and Pecten maximus. Genes involved in ion transport were also identified as potentially involved in calcification either via the maintenance of cell acid–base balance or transport of critical ions to the extrapallial space, the site of shell assembly. These data expand the number of candidate biomineralization proteins in bivalve molluscs for future functional studies and define a minimal functional protein domain set required to produce solid microstructures from soluble calcium carbonate. This is important for understanding molluscan shell evolution, the likely impacts of environmental change on biomineralization processes, materials science, and biomimicry research.
author2 True, John
European Union Seventh Framework Programme
REA
format Article in Journal/Newspaper
author Yarra, Tejaswi
Blaxter, Mark
Clark, Melody S
spellingShingle Yarra, Tejaswi
Blaxter, Mark
Clark, Melody S
A Bivalve Biomineralization Toolbox
author_facet Yarra, Tejaswi
Blaxter, Mark
Clark, Melody S
author_sort Yarra, Tejaswi
title A Bivalve Biomineralization Toolbox
title_short A Bivalve Biomineralization Toolbox
title_full A Bivalve Biomineralization Toolbox
title_fullStr A Bivalve Biomineralization Toolbox
title_full_unstemmed A Bivalve Biomineralization Toolbox
title_sort bivalve biomineralization toolbox
publisher Oxford University Press (OUP)
publishDate 2021
url http://dx.doi.org/10.1093/molbev/msab153
http://academic.oup.com/mbe/advance-article-pdf/doi/10.1093/molbev/msab153/39310566/msab153.pdf
http://academic.oup.com/mbe/article-pdf/38/9/4043/39882203/msab153.pdf
genre Crassostrea gigas
genre_facet Crassostrea gigas
op_source Molecular Biology and Evolution
volume 38, issue 9, page 4043-4055
ISSN 1537-1719
op_rights http://creativecommons.org/licenses/by/4.0/
op_doi https://doi.org/10.1093/molbev/msab153
container_title Molecular Biology and Evolution
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