Modelling copepod development: current limitations and a new realistic approach

Abstract Gentleman, W. C., Neuheimer, A. B., and Campbell, R. G. 2008. Modelling copepod development: current limitations and a new realistic approach. – ICES Journal of Marine Science, 65: 399–413. To predict the influence of environmental variability on copepod dynamics and production, models must...

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Published in:ICES Journal of Marine Science
Main Authors: Gentleman, W. C., Neuheimer, A. B., Campbell, R. G.
Format: Article in Journal/Newspaper
Language:English
Published: Oxford University Press (OUP) 2008
Subjects:
Online Access:http://dx.doi.org/10.1093/icesjms/fsn047
http://academic.oup.com/icesjms/article-pdf/65/3/399/29131164/fsn047.pdf
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spelling croxfordunivpr:10.1093/icesjms/fsn047 2024-03-24T09:01:11+00:00 Modelling copepod development: current limitations and a new realistic approach Gentleman, W. C. Neuheimer, A. B. Campbell, R. G. 2008 http://dx.doi.org/10.1093/icesjms/fsn047 http://academic.oup.com/icesjms/article-pdf/65/3/399/29131164/fsn047.pdf en eng Oxford University Press (OUP) ICES Journal of Marine Science volume 65, issue 3, page 399-413 ISSN 1095-9289 1054-3139 Ecology Aquatic Science Ecology, Evolution, Behavior and Systematics Oceanography journal-article 2008 croxfordunivpr https://doi.org/10.1093/icesjms/fsn047 2024-02-26T16:28:20Z Abstract Gentleman, W. C., Neuheimer, A. B., and Campbell, R. G. 2008. Modelling copepod development: current limitations and a new realistic approach. – ICES Journal of Marine Science, 65: 399–413. To predict the influence of environmental variability on copepod dynamics and production, models must account for the effects of temperature and food on stage-dependent time-scales. Here, data for development-time means and variance of Calanus finmarchicus are used to quantify the limitations of existing models. Weight-based individual models are sensitive to uncertain parameters, such as moulting weights, assimilation efficiency, and environmental dependencies, making them highly difficult to calibrate. The accuracy of stage-based population models using ordinary differential equations depends on model structure, with some predicted generation times being incorrect by months. Even when large numbers of age classes are used to reduce modelled variability, it is not possible to make variability consistent with the data. Accuracy of mean times for stage-based population models using difference equations requires a small time-step, which results in large numbers of age classes and modelled variability that is underestimated by orders of magnitude, unless a probabilistic moult fraction is used. We present a new stage-based individual model that avoids the limitations of other models and successfully represents C. finmarchicus mean development timing and associated variability. This approach can be adapted easily for other species, as well as dynamic environmental conditions. Article in Journal/Newspaper Calanus finmarchicus Oxford University Press ICES Journal of Marine Science 65 3 399 413
institution Open Polar
collection Oxford University Press
op_collection_id croxfordunivpr
language English
topic Ecology
Aquatic Science
Ecology, Evolution, Behavior and Systematics
Oceanography
spellingShingle Ecology
Aquatic Science
Ecology, Evolution, Behavior and Systematics
Oceanography
Gentleman, W. C.
Neuheimer, A. B.
Campbell, R. G.
Modelling copepod development: current limitations and a new realistic approach
topic_facet Ecology
Aquatic Science
Ecology, Evolution, Behavior and Systematics
Oceanography
description Abstract Gentleman, W. C., Neuheimer, A. B., and Campbell, R. G. 2008. Modelling copepod development: current limitations and a new realistic approach. – ICES Journal of Marine Science, 65: 399–413. To predict the influence of environmental variability on copepod dynamics and production, models must account for the effects of temperature and food on stage-dependent time-scales. Here, data for development-time means and variance of Calanus finmarchicus are used to quantify the limitations of existing models. Weight-based individual models are sensitive to uncertain parameters, such as moulting weights, assimilation efficiency, and environmental dependencies, making them highly difficult to calibrate. The accuracy of stage-based population models using ordinary differential equations depends on model structure, with some predicted generation times being incorrect by months. Even when large numbers of age classes are used to reduce modelled variability, it is not possible to make variability consistent with the data. Accuracy of mean times for stage-based population models using difference equations requires a small time-step, which results in large numbers of age classes and modelled variability that is underestimated by orders of magnitude, unless a probabilistic moult fraction is used. We present a new stage-based individual model that avoids the limitations of other models and successfully represents C. finmarchicus mean development timing and associated variability. This approach can be adapted easily for other species, as well as dynamic environmental conditions.
format Article in Journal/Newspaper
author Gentleman, W. C.
Neuheimer, A. B.
Campbell, R. G.
author_facet Gentleman, W. C.
Neuheimer, A. B.
Campbell, R. G.
author_sort Gentleman, W. C.
title Modelling copepod development: current limitations and a new realistic approach
title_short Modelling copepod development: current limitations and a new realistic approach
title_full Modelling copepod development: current limitations and a new realistic approach
title_fullStr Modelling copepod development: current limitations and a new realistic approach
title_full_unstemmed Modelling copepod development: current limitations and a new realistic approach
title_sort modelling copepod development: current limitations and a new realistic approach
publisher Oxford University Press (OUP)
publishDate 2008
url http://dx.doi.org/10.1093/icesjms/fsn047
http://academic.oup.com/icesjms/article-pdf/65/3/399/29131164/fsn047.pdf
genre Calanus finmarchicus
genre_facet Calanus finmarchicus
op_source ICES Journal of Marine Science
volume 65, issue 3, page 399-413
ISSN 1095-9289 1054-3139
op_doi https://doi.org/10.1093/icesjms/fsn047
container_title ICES Journal of Marine Science
container_volume 65
container_issue 3
container_start_page 399
op_container_end_page 413
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