Discovery of a novel bacterial class with the capacity to drive sulfur cycling and microbiome structure in a paleo-ocean analog

Abstract Uncultivated microbial taxa represent a large fraction of global microbial diversity and likely drive numerous biogeochemical transformations in natural ecosystems. Geographically isolated, polar ecosystems are complex microbial biomes and refuges of underexplored taxonomic and functional b...

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Published in:ISME Communications
Main Authors: Vigneron, Adrien, Vincent, Warwick F, Lovejoy, Connie
Other Authors: Canada First Research Excellence Fund, Gouvernement du Canada | Natural Sciences and Engineering Research Council of Canada, Gouvernement du Canada | Réseaux de centres d'excellence | AUTO21 Network of Centres of Excellence
Format: Article in Journal/Newspaper
Language:English
Published: Oxford University Press (OUP) 2023
Subjects:
Online Access:http://dx.doi.org/10.1038/s43705-023-00287-9
https://www.nature.com/articles/s43705-023-00287-9.pdf
https://www.nature.com/articles/s43705-023-00287-9
https://academic.oup.com/ismecommun/article-pdf/3/1/82/56376446/43705_2023_article_287.pdf
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spelling croxfordunivpr:10.1038/s43705-023-00287-9 2024-04-07T07:49:48+00:00 Discovery of a novel bacterial class with the capacity to drive sulfur cycling and microbiome structure in a paleo-ocean analog Vigneron, Adrien Vincent, Warwick F Lovejoy, Connie Canada First Research Excellence Fund Gouvernement du Canada | Natural Sciences and Engineering Research Council of Canada Gouvernement du Canada | Réseaux de centres d'excellence | AUTO21 Network of Centres of Excellence Canada First Research Excellence Fund Gouvernement du Canada | Natural Sciences and Engineering Research Council of Canada Gouvernement du Canada | Réseaux de centres d'excellence | AUTO21 Network of Centres of Excellence Canada First Research Excellence Fund Canada First Research Excellence Fund Gouvernement du Canada | Réseaux de centres d'excellence | AUTO21 Network of Centres of Excellence 2023 http://dx.doi.org/10.1038/s43705-023-00287-9 https://www.nature.com/articles/s43705-023-00287-9.pdf https://www.nature.com/articles/s43705-023-00287-9 https://academic.oup.com/ismecommun/article-pdf/3/1/82/56376446/43705_2023_article_287.pdf en eng Oxford University Press (OUP) https://creativecommons.org/licenses/by/4.0/ https://creativecommons.org/licenses/by/4.0 https://creativecommons.org/licenses/by/4.0 ISME Communications volume 3, issue 1 ISSN 2730-6151 General Medicine journal-article 2023 croxfordunivpr https://doi.org/10.1038/s43705-023-00287-9 2024-03-08T02:58:30Z Abstract Uncultivated microbial taxa represent a large fraction of global microbial diversity and likely drive numerous biogeochemical transformations in natural ecosystems. Geographically isolated, polar ecosystems are complex microbial biomes and refuges of underexplored taxonomic and functional biodiversity. Combining amplicon sequencing with genome-centric metagenomic analysis of samples from one of the world’s northernmost lakes (Lake A, Ellesmere Island, Canadian High Arctic), we identified a novel bacterial taxon that dominates in the bottom layer of anoxic, sulfidic, relict sea water that was isolated from the Arctic Ocean some 3000 years ago. Based on phylogenomic comparative analyses, we propose that these bacteria represent a new Class within the poorly described Electryoneota/AABM5-125-24 candidate phylum. This novel class, for which we propose the name Tariuqbacteria, may be either a relict of ancient ocean conditions or endemic to this High Arctic system, provisionally providing a rare example of high-taxonomy level endemism. Consistent with the geochemistry of the bottom water, the genetic composition of the Candidatus Tariuqbacter genome revealed a strictly anaerobic lifestyle with the potential for sulfate and sulfur reduction, a versatile carbon metabolism and the capability to eliminate competing bacteria through methylarsenite production, suggesting an allelochemical influence on microbiome structure by this planktonic microbe. Article in Journal/Newspaper Arctic Arctic Ocean Ellesmere Island Oxford University Press Arctic Arctic Ocean Ellesmere Island ISME Communications 3 1
institution Open Polar
collection Oxford University Press
op_collection_id croxfordunivpr
language English
topic General Medicine
spellingShingle General Medicine
Vigneron, Adrien
Vincent, Warwick F
Lovejoy, Connie
Discovery of a novel bacterial class with the capacity to drive sulfur cycling and microbiome structure in a paleo-ocean analog
topic_facet General Medicine
description Abstract Uncultivated microbial taxa represent a large fraction of global microbial diversity and likely drive numerous biogeochemical transformations in natural ecosystems. Geographically isolated, polar ecosystems are complex microbial biomes and refuges of underexplored taxonomic and functional biodiversity. Combining amplicon sequencing with genome-centric metagenomic analysis of samples from one of the world’s northernmost lakes (Lake A, Ellesmere Island, Canadian High Arctic), we identified a novel bacterial taxon that dominates in the bottom layer of anoxic, sulfidic, relict sea water that was isolated from the Arctic Ocean some 3000 years ago. Based on phylogenomic comparative analyses, we propose that these bacteria represent a new Class within the poorly described Electryoneota/AABM5-125-24 candidate phylum. This novel class, for which we propose the name Tariuqbacteria, may be either a relict of ancient ocean conditions or endemic to this High Arctic system, provisionally providing a rare example of high-taxonomy level endemism. Consistent with the geochemistry of the bottom water, the genetic composition of the Candidatus Tariuqbacter genome revealed a strictly anaerobic lifestyle with the potential for sulfate and sulfur reduction, a versatile carbon metabolism and the capability to eliminate competing bacteria through methylarsenite production, suggesting an allelochemical influence on microbiome structure by this planktonic microbe.
author2 Canada First Research Excellence Fund
Gouvernement du Canada | Natural Sciences and Engineering Research Council of Canada
Gouvernement du Canada | Réseaux de centres d'excellence | AUTO21 Network of Centres of Excellence
Canada First Research Excellence Fund
Gouvernement du Canada | Natural Sciences and Engineering Research Council of Canada
Gouvernement du Canada | Réseaux de centres d'excellence | AUTO21 Network of Centres of Excellence
Canada First Research Excellence Fund
Canada First Research Excellence Fund
Gouvernement du Canada | Réseaux de centres d'excellence | AUTO21 Network of Centres of Excellence
format Article in Journal/Newspaper
author Vigneron, Adrien
Vincent, Warwick F
Lovejoy, Connie
author_facet Vigneron, Adrien
Vincent, Warwick F
Lovejoy, Connie
author_sort Vigneron, Adrien
title Discovery of a novel bacterial class with the capacity to drive sulfur cycling and microbiome structure in a paleo-ocean analog
title_short Discovery of a novel bacterial class with the capacity to drive sulfur cycling and microbiome structure in a paleo-ocean analog
title_full Discovery of a novel bacterial class with the capacity to drive sulfur cycling and microbiome structure in a paleo-ocean analog
title_fullStr Discovery of a novel bacterial class with the capacity to drive sulfur cycling and microbiome structure in a paleo-ocean analog
title_full_unstemmed Discovery of a novel bacterial class with the capacity to drive sulfur cycling and microbiome structure in a paleo-ocean analog
title_sort discovery of a novel bacterial class with the capacity to drive sulfur cycling and microbiome structure in a paleo-ocean analog
publisher Oxford University Press (OUP)
publishDate 2023
url http://dx.doi.org/10.1038/s43705-023-00287-9
https://www.nature.com/articles/s43705-023-00287-9.pdf
https://www.nature.com/articles/s43705-023-00287-9
https://academic.oup.com/ismecommun/article-pdf/3/1/82/56376446/43705_2023_article_287.pdf
geographic Arctic
Arctic Ocean
Ellesmere Island
geographic_facet Arctic
Arctic Ocean
Ellesmere Island
genre Arctic
Arctic Ocean
Ellesmere Island
genre_facet Arctic
Arctic Ocean
Ellesmere Island
op_source ISME Communications
volume 3, issue 1
ISSN 2730-6151
op_rights https://creativecommons.org/licenses/by/4.0/
https://creativecommons.org/licenses/by/4.0
https://creativecommons.org/licenses/by/4.0
op_doi https://doi.org/10.1038/s43705-023-00287-9
container_title ISME Communications
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