Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus

Abstract Ostreococcus is a marine picophytoeukaryote for which culture studies indicate there are ‘high-light’ and ‘low-light’ adapted ecotypes. Representatives of these ecotypes fall within two to three 18S ribosomal DNA (rDNA) clades for the former and one for the latter. However, clade distributi...

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Published in:The ISME Journal
Main Authors: Demir-Hilton, Elif, Sudek, Sebastian, Cuvelier, Marie L, Gentemann, Chelle L, Zehr, Jonathan P, Worden, Alexandra Z
Format: Article in Journal/Newspaper
Language:English
Published: Oxford University Press (OUP) 2011
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Online Access:http://dx.doi.org/10.1038/ismej.2010.209
http://www.nature.com/articles/ismej2010209.pdf
http://www.nature.com/articles/ismej2010209
https://academic.oup.com/ismej/article-pdf/5/7/1095/56548213/41396_2011_article_bfismej2010209.pdf
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spelling croxfordunivpr:10.1038/ismej.2010.209 2024-06-23T07:55:16+00:00 Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus Demir-Hilton, Elif Sudek, Sebastian Cuvelier, Marie L Gentemann, Chelle L Zehr, Jonathan P Worden, Alexandra Z 2011 http://dx.doi.org/10.1038/ismej.2010.209 http://www.nature.com/articles/ismej2010209.pdf http://www.nature.com/articles/ismej2010209 https://academic.oup.com/ismej/article-pdf/5/7/1095/56548213/41396_2011_article_bfismej2010209.pdf en eng Oxford University Press (OUP) https://academic.oup.com/pages/standard-publication-reuse-rights The ISME Journal volume 5, issue 7, page 1095-1107 ISSN 1751-7362 1751-7370 journal-article 2011 croxfordunivpr https://doi.org/10.1038/ismej.2010.209 2024-06-11T04:20:42Z Abstract Ostreococcus is a marine picophytoeukaryote for which culture studies indicate there are ‘high-light’ and ‘low-light’ adapted ecotypes. Representatives of these ecotypes fall within two to three 18S ribosomal DNA (rDNA) clades for the former and one for the latter. However, clade distributions and relationships to this form of niche partitioning are unknown in nature. We developed two quantitative PCR primer-probe sets and enumerated the proposed ecotypes in the Pacific Ocean as well as the subtropical and tropical North Atlantic. Statistical differences in factors such as salinity, temperature and NO3 indicated the ecophysiological parameters behind clade distributions are more complex than irradiance alone. Clade OII, containing the putatively low-light adapted strains, was detected at warm oligotrophic sites. In contrast, Clade OI, containing high-light adapted strains, was present in cooler mesotrophic and coastal waters. Maximal OI abundance (19 555±37 18S rDNA copies per ml) was detected in mesotrophic waters at 40 m depth, approaching the nutricline. OII was often more abundant at the deep chlorophyll maximum, when nutrient concentrations were significantly higher than at the surface (stratified euphotic zone waters). However, in mixed euphotic-zone water columns, relatively high numbers (for example, 891±107 18S rDNA copies per ml, Sargasso Sea, springtime) were detected at the surface. Both Clades OI and OII were found at multiple euphotic zone depths, but co-occurrence at the same geographical location appeared rare and was detected only in continental slope waters. In situ growth rate estimates using these primer-probes and better comprehension of physiology will enhance ecological understanding of Ostreococcus Clades OII and OI which appear to be oceanic and coastal clades, respectively. Article in Journal/Newspaper North Atlantic Oxford University Press Pacific The ISME Journal 5 7 1095 1107
institution Open Polar
collection Oxford University Press
op_collection_id croxfordunivpr
language English
description Abstract Ostreococcus is a marine picophytoeukaryote for which culture studies indicate there are ‘high-light’ and ‘low-light’ adapted ecotypes. Representatives of these ecotypes fall within two to three 18S ribosomal DNA (rDNA) clades for the former and one for the latter. However, clade distributions and relationships to this form of niche partitioning are unknown in nature. We developed two quantitative PCR primer-probe sets and enumerated the proposed ecotypes in the Pacific Ocean as well as the subtropical and tropical North Atlantic. Statistical differences in factors such as salinity, temperature and NO3 indicated the ecophysiological parameters behind clade distributions are more complex than irradiance alone. Clade OII, containing the putatively low-light adapted strains, was detected at warm oligotrophic sites. In contrast, Clade OI, containing high-light adapted strains, was present in cooler mesotrophic and coastal waters. Maximal OI abundance (19 555±37 18S rDNA copies per ml) was detected in mesotrophic waters at 40 m depth, approaching the nutricline. OII was often more abundant at the deep chlorophyll maximum, when nutrient concentrations were significantly higher than at the surface (stratified euphotic zone waters). However, in mixed euphotic-zone water columns, relatively high numbers (for example, 891±107 18S rDNA copies per ml, Sargasso Sea, springtime) were detected at the surface. Both Clades OI and OII were found at multiple euphotic zone depths, but co-occurrence at the same geographical location appeared rare and was detected only in continental slope waters. In situ growth rate estimates using these primer-probes and better comprehension of physiology will enhance ecological understanding of Ostreococcus Clades OII and OI which appear to be oceanic and coastal clades, respectively.
format Article in Journal/Newspaper
author Demir-Hilton, Elif
Sudek, Sebastian
Cuvelier, Marie L
Gentemann, Chelle L
Zehr, Jonathan P
Worden, Alexandra Z
spellingShingle Demir-Hilton, Elif
Sudek, Sebastian
Cuvelier, Marie L
Gentemann, Chelle L
Zehr, Jonathan P
Worden, Alexandra Z
Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus
author_facet Demir-Hilton, Elif
Sudek, Sebastian
Cuvelier, Marie L
Gentemann, Chelle L
Zehr, Jonathan P
Worden, Alexandra Z
author_sort Demir-Hilton, Elif
title Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus
title_short Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus
title_full Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus
title_fullStr Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus
title_full_unstemmed Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus
title_sort global distribution patterns of distinct clades of the photosynthetic picoeukaryote ostreococcus
publisher Oxford University Press (OUP)
publishDate 2011
url http://dx.doi.org/10.1038/ismej.2010.209
http://www.nature.com/articles/ismej2010209.pdf
http://www.nature.com/articles/ismej2010209
https://academic.oup.com/ismej/article-pdf/5/7/1095/56548213/41396_2011_article_bfismej2010209.pdf
geographic Pacific
geographic_facet Pacific
genre North Atlantic
genre_facet North Atlantic
op_source The ISME Journal
volume 5, issue 7, page 1095-1107
ISSN 1751-7362 1751-7370
op_rights https://academic.oup.com/pages/standard-publication-reuse-rights
op_doi https://doi.org/10.1038/ismej.2010.209
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