Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs

The Antarctic terrestrial environment harbors a diverse community of microorganisms, which have adapted to the extreme conditions. The aim of this study was to describe the composition of microbial communities in a diverse range of terrestrial environments (various biocrusts and soils, sands from ep...

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Published in:Frontiers in Microbiology
Main Authors: Pushkareva, Ekaterina, Elster, Josef, Kudoh, Sakae, Imura, Satoshi, Becker, Burkhard
Format: Article in Journal/Newspaper
Language:unknown
Published: Frontiers Media SA 2024
Subjects:
Online Access:http://dx.doi.org/10.3389/fmicb.2023.1323148
https://www.frontiersin.org/articles/10.3389/fmicb.2023.1323148/full
id crfrontiers:10.3389/fmicb.2023.1323148
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spelling crfrontiers:10.3389/fmicb.2023.1323148 2024-09-09T19:05:16+00:00 Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs Pushkareva, Ekaterina Elster, Josef Kudoh, Sakae Imura, Satoshi Becker, Burkhard 2024 http://dx.doi.org/10.3389/fmicb.2023.1323148 https://www.frontiersin.org/articles/10.3389/fmicb.2023.1323148/full unknown Frontiers Media SA https://creativecommons.org/licenses/by/4.0/ Frontiers in Microbiology volume 14 ISSN 1664-302X journal-article 2024 crfrontiers https://doi.org/10.3389/fmicb.2023.1323148 2024-07-09T04:04:57Z The Antarctic terrestrial environment harbors a diverse community of microorganisms, which have adapted to the extreme conditions. The aim of this study was to describe the composition of microbial communities in a diverse range of terrestrial environments (various biocrusts and soils, sands from ephemeral wetlands, biofilms, endolithic and hypolithic communities) in East Antarctica using both molecular and morphological approaches. Amplicon sequencing of the 16S rRNA gene revealed the dominance of Chloroflexi, Cyanobacteria and Firmicutes, while sequencing of the 18S rRNA gene showed the prevalence of Alveolata, Chloroplastida, Metazoa, and Rhizaria. This study also provided a comprehensive assessment of the microphototrophic community revealing a diversity of cyanobacteria and eukaryotic microalgae in various Antarctic terrestrial samples. Filamentous cyanobacteria belonging to the orders Oscillatoriales and Pseudanabaenales dominated prokaryotic community, while members of Trebouxiophyceae were the most abundant representatives of eukaryotes. In addition, the co-occurrence analysis showed a prevalence of positive correlations with bacterial taxa frequently co-occurring together. Article in Journal/Newspaper Antarc* Antarctic Antarctica East Antarctica Frontiers (Publisher) Antarctic East Antarctica The Antarctic Frontiers in Microbiology 14
institution Open Polar
collection Frontiers (Publisher)
op_collection_id crfrontiers
language unknown
description The Antarctic terrestrial environment harbors a diverse community of microorganisms, which have adapted to the extreme conditions. The aim of this study was to describe the composition of microbial communities in a diverse range of terrestrial environments (various biocrusts and soils, sands from ephemeral wetlands, biofilms, endolithic and hypolithic communities) in East Antarctica using both molecular and morphological approaches. Amplicon sequencing of the 16S rRNA gene revealed the dominance of Chloroflexi, Cyanobacteria and Firmicutes, while sequencing of the 18S rRNA gene showed the prevalence of Alveolata, Chloroplastida, Metazoa, and Rhizaria. This study also provided a comprehensive assessment of the microphototrophic community revealing a diversity of cyanobacteria and eukaryotic microalgae in various Antarctic terrestrial samples. Filamentous cyanobacteria belonging to the orders Oscillatoriales and Pseudanabaenales dominated prokaryotic community, while members of Trebouxiophyceae were the most abundant representatives of eukaryotes. In addition, the co-occurrence analysis showed a prevalence of positive correlations with bacterial taxa frequently co-occurring together.
format Article in Journal/Newspaper
author Pushkareva, Ekaterina
Elster, Josef
Kudoh, Sakae
Imura, Satoshi
Becker, Burkhard
spellingShingle Pushkareva, Ekaterina
Elster, Josef
Kudoh, Sakae
Imura, Satoshi
Becker, Burkhard
Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs
author_facet Pushkareva, Ekaterina
Elster, Josef
Kudoh, Sakae
Imura, Satoshi
Becker, Burkhard
author_sort Pushkareva, Ekaterina
title Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs
title_short Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs
title_full Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs
title_fullStr Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs
title_full_unstemmed Microbial community composition of terrestrial habitats in East Antarctica with a focus on microphototrophs
title_sort microbial community composition of terrestrial habitats in east antarctica with a focus on microphototrophs
publisher Frontiers Media SA
publishDate 2024
url http://dx.doi.org/10.3389/fmicb.2023.1323148
https://www.frontiersin.org/articles/10.3389/fmicb.2023.1323148/full
geographic Antarctic
East Antarctica
The Antarctic
geographic_facet Antarctic
East Antarctica
The Antarctic
genre Antarc*
Antarctic
Antarctica
East Antarctica
genre_facet Antarc*
Antarctic
Antarctica
East Antarctica
op_source Frontiers in Microbiology
volume 14
ISSN 1664-302X
op_rights https://creativecommons.org/licenses/by/4.0/
op_doi https://doi.org/10.3389/fmicb.2023.1323148
container_title Frontiers in Microbiology
container_volume 14
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