Spiking regional vis-NIR calibration models with local samples to predict soil organic carbon in two High Arctic polar deserts using a vis-NIR probe

Guy, A. L., Siciliano, S. D. and Lamb, E. G. 2015. Spiking regional vis-NIR calibration models with local samples to predict soil organic carbon in two High Arctic polar deserts using a vis-NIR probe. Can. J. Soil Sci. 95: 237–249. In situ visible and near-infrared (vis-NIR) spectroscopy is a potent...

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Published in:Canadian Journal of Soil Science
Main Authors: Guy, Amanda L., Siciliano, Steven D., Lamb, Eric G.
Format: Article in Journal/Newspaper
Language:English
Published: Canadian Science Publishing 2015
Subjects:
Online Access:http://dx.doi.org/10.4141/cjss-2015-004
http://www.nrcresearchpress.com/doi/full-xml/10.4141/cjss-2015-004
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spelling crcansciencepubl:10.4141/cjss-2015-004 2024-06-23T07:49:33+00:00 Spiking regional vis-NIR calibration models with local samples to predict soil organic carbon in two High Arctic polar deserts using a vis-NIR probe Guy, Amanda L. Siciliano, Steven D. Lamb, Eric G. 2015 http://dx.doi.org/10.4141/cjss-2015-004 http://www.nrcresearchpress.com/doi/full-xml/10.4141/cjss-2015-004 http://www.nrcresearchpress.com/doi/pdf/10.4141/cjss-2015-004 en eng Canadian Science Publishing http://www.nrcresearchpress.com/page/about/CorporateTextAndDataMining Canadian Journal of Soil Science volume 95, issue 3, page 237-249 ISSN 0008-4271 1918-1841 journal-article 2015 crcansciencepubl https://doi.org/10.4141/cjss-2015-004 2024-06-06T04:11:17Z Guy, A. L., Siciliano, S. D. and Lamb, E. G. 2015. Spiking regional vis-NIR calibration models with local samples to predict soil organic carbon in two High Arctic polar deserts using a vis-NIR probe. Can. J. Soil Sci. 95: 237–249. In situ visible and near-infrared (vis-NIR) spectroscopy is a potential solution to the logistic constraints limiting the accuracy and spatial resolution of soil organic carbon (SOC) estimates for Arctic regions. The objective of our study was to develop a calibration model based on field-condition soils for in situ applications to predict SOC in High Arctic polar desert soils from vis-NIR spectra. Soils (n=240) for calibration models were collected from three regional Canadian Arctic sites in 2010 and two local target sites in 2013. Local and regional calibration models were developed using partial least squares regression (PLSR). We assessed whether spiking or spiking and extra-weighting, regional models with calibration samples from local sites improved prediction of the local sites. The local model yielded successful prediction of target sites (R 2 =0.91) whereas unspiked regional models had poor prediction accuracy (R 2 =0.07 to 0.36; n=4). Spiking regional models with as few as 12 local samples greatly improved the SOC prediction of target sites; the best spiked models had R 2 between 0.69 and 0.86. Extra-weighting spiking subsets in regional models yielded limited improvements in prediction performance. These results suggest that regional vis-NIR calibration models can be successfully used to predict SOC in High Arctic polar desert soils. The in situ application of these calibration models using field-portable instruments in remote areas, relative to traditional laboratory methods, can achieve higher sample sizes and the ability to characterize the spatial variability of SOC. Article in Journal/Newspaper Arctic polar desert Canadian Science Publishing Arctic Canadian Journal of Soil Science 95 3 237 249
institution Open Polar
collection Canadian Science Publishing
op_collection_id crcansciencepubl
language English
description Guy, A. L., Siciliano, S. D. and Lamb, E. G. 2015. Spiking regional vis-NIR calibration models with local samples to predict soil organic carbon in two High Arctic polar deserts using a vis-NIR probe. Can. J. Soil Sci. 95: 237–249. In situ visible and near-infrared (vis-NIR) spectroscopy is a potential solution to the logistic constraints limiting the accuracy and spatial resolution of soil organic carbon (SOC) estimates for Arctic regions. The objective of our study was to develop a calibration model based on field-condition soils for in situ applications to predict SOC in High Arctic polar desert soils from vis-NIR spectra. Soils (n=240) for calibration models were collected from three regional Canadian Arctic sites in 2010 and two local target sites in 2013. Local and regional calibration models were developed using partial least squares regression (PLSR). We assessed whether spiking or spiking and extra-weighting, regional models with calibration samples from local sites improved prediction of the local sites. The local model yielded successful prediction of target sites (R 2 =0.91) whereas unspiked regional models had poor prediction accuracy (R 2 =0.07 to 0.36; n=4). Spiking regional models with as few as 12 local samples greatly improved the SOC prediction of target sites; the best spiked models had R 2 between 0.69 and 0.86. Extra-weighting spiking subsets in regional models yielded limited improvements in prediction performance. These results suggest that regional vis-NIR calibration models can be successfully used to predict SOC in High Arctic polar desert soils. The in situ application of these calibration models using field-portable instruments in remote areas, relative to traditional laboratory methods, can achieve higher sample sizes and the ability to characterize the spatial variability of SOC.
format Article in Journal/Newspaper
author Guy, Amanda L.
Siciliano, Steven D.
Lamb, Eric G.
spellingShingle Guy, Amanda L.
Siciliano, Steven D.
Lamb, Eric G.
Spiking regional vis-NIR calibration models with local samples to predict soil organic carbon in two High Arctic polar deserts using a vis-NIR probe
author_facet Guy, Amanda L.
Siciliano, Steven D.
Lamb, Eric G.
author_sort Guy, Amanda L.
title Spiking regional vis-NIR calibration models with local samples to predict soil organic carbon in two High Arctic polar deserts using a vis-NIR probe
title_short Spiking regional vis-NIR calibration models with local samples to predict soil organic carbon in two High Arctic polar deserts using a vis-NIR probe
title_full Spiking regional vis-NIR calibration models with local samples to predict soil organic carbon in two High Arctic polar deserts using a vis-NIR probe
title_fullStr Spiking regional vis-NIR calibration models with local samples to predict soil organic carbon in two High Arctic polar deserts using a vis-NIR probe
title_full_unstemmed Spiking regional vis-NIR calibration models with local samples to predict soil organic carbon in two High Arctic polar deserts using a vis-NIR probe
title_sort spiking regional vis-nir calibration models with local samples to predict soil organic carbon in two high arctic polar deserts using a vis-nir probe
publisher Canadian Science Publishing
publishDate 2015
url http://dx.doi.org/10.4141/cjss-2015-004
http://www.nrcresearchpress.com/doi/full-xml/10.4141/cjss-2015-004
http://www.nrcresearchpress.com/doi/pdf/10.4141/cjss-2015-004
geographic Arctic
geographic_facet Arctic
genre Arctic
polar desert
genre_facet Arctic
polar desert
op_source Canadian Journal of Soil Science
volume 95, issue 3, page 237-249
ISSN 0008-4271 1918-1841
op_rights http://www.nrcresearchpress.com/page/about/CorporateTextAndDataMining
op_doi https://doi.org/10.4141/cjss-2015-004
container_title Canadian Journal of Soil Science
container_volume 95
container_issue 3
container_start_page 237
op_container_end_page 249
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