DNA barcode data reveal biogeographic trends in Arctic non-biting midges

Chironomid flies (non-biting midges) are among the most abundant and diverse animals in Arctic regions, but detailed analyses of species distributions and biogeographical patterns are hampered by challenging taxonomy and reliance on morphology for species-level identification. Here we take advantage...

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Published in:Genome
Main Authors: Ekrem, Torbjørn, Stur, Elisabeth, Orton, Matthew G., Adamowicz, Sarah J.
Format: Article in Journal/Newspaper
Language:English
Published: Canadian Science Publishing 2018
Subjects:
Online Access:http://dx.doi.org/10.1139/gen-2018-0100
http://www.nrcresearchpress.com/doi/full-xml/10.1139/gen-2018-0100
http://www.nrcresearchpress.com/doi/pdf/10.1139/gen-2018-0100
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spelling crcansciencepubl:10.1139/gen-2018-0100 2024-06-23T07:49:39+00:00 DNA barcode data reveal biogeographic trends in Arctic non-biting midges Ekrem, Torbjørn Stur, Elisabeth Orton, Matthew G. Adamowicz, Sarah J. 2018 http://dx.doi.org/10.1139/gen-2018-0100 http://www.nrcresearchpress.com/doi/full-xml/10.1139/gen-2018-0100 http://www.nrcresearchpress.com/doi/pdf/10.1139/gen-2018-0100 en eng Canadian Science Publishing http://www.nrcresearchpress.com/page/about/CorporateTextAndDataMining Genome volume 61, issue 11, page 787-796 ISSN 0831-2796 1480-3321 journal-article 2018 crcansciencepubl https://doi.org/10.1139/gen-2018-0100 2024-06-13T04:10:50Z Chironomid flies (non-biting midges) are among the most abundant and diverse animals in Arctic regions, but detailed analyses of species distributions and biogeographical patterns are hampered by challenging taxonomy and reliance on morphology for species-level identification. Here we take advantage of available DNA barcode data of Arctic Chironomidae in BOLD to analyse similarities in species distributions across a northern Nearctic – West Palearctic gradient. Using more than 260 000 barcodes representing 4666 BINs (Barcode Index Numbers) and 826 named species (some with interim names) from a combination of public and novel data, we show that the Greenland chironomid fauna shows affinities to both the Nearctic and the West Palearctic regions. While raw taxon counts indicate a strong Greenland – North American affinity, comparisons using Chao’s dissimilarity metric support a slightly higher similarity between Greenland and West Palearctic chironomid communities. Results were relatively consistent across different definitions of species taxonomic units, including morphologically determined species, BINs, and superBINs based on a ∼4.5% threshold. While most taxa found in Greenland are shared with at least one other region, reflecting circum-Arctic dispersal, our results also reveal that Greenland harbours a small endemic biodiversity. Our exploratory study showcases how DNA barcoding efforts using standardized gene regions contribute to an understanding of broad-scale patterns in biogeography by enabling joint analysis of public DNA sequence data derived from diverse prior studies. Article in Journal/Newspaper Arctic Greenland Canadian Science Publishing Arctic Greenland Genome 61 11 787 796
institution Open Polar
collection Canadian Science Publishing
op_collection_id crcansciencepubl
language English
description Chironomid flies (non-biting midges) are among the most abundant and diverse animals in Arctic regions, but detailed analyses of species distributions and biogeographical patterns are hampered by challenging taxonomy and reliance on morphology for species-level identification. Here we take advantage of available DNA barcode data of Arctic Chironomidae in BOLD to analyse similarities in species distributions across a northern Nearctic – West Palearctic gradient. Using more than 260 000 barcodes representing 4666 BINs (Barcode Index Numbers) and 826 named species (some with interim names) from a combination of public and novel data, we show that the Greenland chironomid fauna shows affinities to both the Nearctic and the West Palearctic regions. While raw taxon counts indicate a strong Greenland – North American affinity, comparisons using Chao’s dissimilarity metric support a slightly higher similarity between Greenland and West Palearctic chironomid communities. Results were relatively consistent across different definitions of species taxonomic units, including morphologically determined species, BINs, and superBINs based on a ∼4.5% threshold. While most taxa found in Greenland are shared with at least one other region, reflecting circum-Arctic dispersal, our results also reveal that Greenland harbours a small endemic biodiversity. Our exploratory study showcases how DNA barcoding efforts using standardized gene regions contribute to an understanding of broad-scale patterns in biogeography by enabling joint analysis of public DNA sequence data derived from diverse prior studies.
format Article in Journal/Newspaper
author Ekrem, Torbjørn
Stur, Elisabeth
Orton, Matthew G.
Adamowicz, Sarah J.
spellingShingle Ekrem, Torbjørn
Stur, Elisabeth
Orton, Matthew G.
Adamowicz, Sarah J.
DNA barcode data reveal biogeographic trends in Arctic non-biting midges
author_facet Ekrem, Torbjørn
Stur, Elisabeth
Orton, Matthew G.
Adamowicz, Sarah J.
author_sort Ekrem, Torbjørn
title DNA barcode data reveal biogeographic trends in Arctic non-biting midges
title_short DNA barcode data reveal biogeographic trends in Arctic non-biting midges
title_full DNA barcode data reveal biogeographic trends in Arctic non-biting midges
title_fullStr DNA barcode data reveal biogeographic trends in Arctic non-biting midges
title_full_unstemmed DNA barcode data reveal biogeographic trends in Arctic non-biting midges
title_sort dna barcode data reveal biogeographic trends in arctic non-biting midges
publisher Canadian Science Publishing
publishDate 2018
url http://dx.doi.org/10.1139/gen-2018-0100
http://www.nrcresearchpress.com/doi/full-xml/10.1139/gen-2018-0100
http://www.nrcresearchpress.com/doi/pdf/10.1139/gen-2018-0100
geographic Arctic
Greenland
geographic_facet Arctic
Greenland
genre Arctic
Greenland
genre_facet Arctic
Greenland
op_source Genome
volume 61, issue 11, page 787-796
ISSN 0831-2796 1480-3321
op_rights http://www.nrcresearchpress.com/page/about/CorporateTextAndDataMining
op_doi https://doi.org/10.1139/gen-2018-0100
container_title Genome
container_volume 61
container_issue 11
container_start_page 787
op_container_end_page 796
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