How robust are Bayesian posterior inferences based on a Ricker model with regards to measurement errors and prior assumptions about parameters?

We present a Bayesian approach of a Ricker stock-recruitment (S/R) analysis accounting for measurement errors on S/R data. We assess the sensitivity of posterior inferences to (i) the choice of Ricker model parameterizations, with special regards to management-related ones, and (ii) prior parameter...

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Published in:Canadian Journal of Fisheries and Aquatic Sciences
Main Authors: Rivot, E, Prévost, E, Parent, E
Format: Article in Journal/Newspaper
Language:English
Published: Canadian Science Publishing 2001
Subjects:
Online Access:http://dx.doi.org/10.1139/f01-167
http://www.nrcresearchpress.com/doi/pdf/10.1139/f01-167
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spelling crcansciencepubl:10.1139/f01-167 2023-12-17T10:27:26+01:00 How robust are Bayesian posterior inferences based on a Ricker model with regards to measurement errors and prior assumptions about parameters? Rivot, E Prévost, E Parent, E 2001 http://dx.doi.org/10.1139/f01-167 http://www.nrcresearchpress.com/doi/pdf/10.1139/f01-167 en eng Canadian Science Publishing http://www.nrcresearchpress.com/page/about/CorporateTextAndDataMining Canadian Journal of Fisheries and Aquatic Sciences volume 58, issue 11, page 2284-2297 ISSN 0706-652X 1205-7533 Aquatic Science Ecology, Evolution, Behavior and Systematics journal-article 2001 crcansciencepubl https://doi.org/10.1139/f01-167 2023-11-19T13:38:49Z We present a Bayesian approach of a Ricker stock-recruitment (S/R) analysis accounting for measurement errors on S/R data. We assess the sensitivity of posterior inferences to (i) the choice of Ricker model parameterizations, with special regards to management-related ones, and (ii) prior parameter distributions. Closed forms for Ricker parameter posterior distributions exist given S/R data known without error. We use this property to develop a procedure based on the Rao–Blackwell formula. This procedure achieves integration of measurement errors by averaging these closed forms over possible S/R data sets sampled from distributions derived from a stochastic model relating field data to the S and R variables. High-quality Bayesian estimates are obtained. The analysis of the influence of different parameterizations and of the priors is made easier. We illustrate our methodological approach by a case study of Atlantic salmon (Salmo salar). Posterior distributions for S and R are computed from a mark–recapture stochastic model. Ignoring measurement errors underestimates parameter uncertainty and overestimates both stock productivity and density dependence. We warn against using management-related parameterizations because it makes the strong prior assumption of long-term sustainability of stocks. Posterior inferences are sensitive to the choice of prior. The use of informative priors as a remedy is discussed. Article in Journal/Newspaper Atlantic salmon Salmo salar Canadian Science Publishing (via Crossref) Canadian Journal of Fisheries and Aquatic Sciences 58 11 2284 2297
institution Open Polar
collection Canadian Science Publishing (via Crossref)
op_collection_id crcansciencepubl
language English
topic Aquatic Science
Ecology, Evolution, Behavior and Systematics
spellingShingle Aquatic Science
Ecology, Evolution, Behavior and Systematics
Rivot, E
Prévost, E
Parent, E
How robust are Bayesian posterior inferences based on a Ricker model with regards to measurement errors and prior assumptions about parameters?
topic_facet Aquatic Science
Ecology, Evolution, Behavior and Systematics
description We present a Bayesian approach of a Ricker stock-recruitment (S/R) analysis accounting for measurement errors on S/R data. We assess the sensitivity of posterior inferences to (i) the choice of Ricker model parameterizations, with special regards to management-related ones, and (ii) prior parameter distributions. Closed forms for Ricker parameter posterior distributions exist given S/R data known without error. We use this property to develop a procedure based on the Rao–Blackwell formula. This procedure achieves integration of measurement errors by averaging these closed forms over possible S/R data sets sampled from distributions derived from a stochastic model relating field data to the S and R variables. High-quality Bayesian estimates are obtained. The analysis of the influence of different parameterizations and of the priors is made easier. We illustrate our methodological approach by a case study of Atlantic salmon (Salmo salar). Posterior distributions for S and R are computed from a mark–recapture stochastic model. Ignoring measurement errors underestimates parameter uncertainty and overestimates both stock productivity and density dependence. We warn against using management-related parameterizations because it makes the strong prior assumption of long-term sustainability of stocks. Posterior inferences are sensitive to the choice of prior. The use of informative priors as a remedy is discussed.
format Article in Journal/Newspaper
author Rivot, E
Prévost, E
Parent, E
author_facet Rivot, E
Prévost, E
Parent, E
author_sort Rivot, E
title How robust are Bayesian posterior inferences based on a Ricker model with regards to measurement errors and prior assumptions about parameters?
title_short How robust are Bayesian posterior inferences based on a Ricker model with regards to measurement errors and prior assumptions about parameters?
title_full How robust are Bayesian posterior inferences based on a Ricker model with regards to measurement errors and prior assumptions about parameters?
title_fullStr How robust are Bayesian posterior inferences based on a Ricker model with regards to measurement errors and prior assumptions about parameters?
title_full_unstemmed How robust are Bayesian posterior inferences based on a Ricker model with regards to measurement errors and prior assumptions about parameters?
title_sort how robust are bayesian posterior inferences based on a ricker model with regards to measurement errors and prior assumptions about parameters?
publisher Canadian Science Publishing
publishDate 2001
url http://dx.doi.org/10.1139/f01-167
http://www.nrcresearchpress.com/doi/pdf/10.1139/f01-167
genre Atlantic salmon
Salmo salar
genre_facet Atlantic salmon
Salmo salar
op_source Canadian Journal of Fisheries and Aquatic Sciences
volume 58, issue 11, page 2284-2297
ISSN 0706-652X 1205-7533
op_rights http://www.nrcresearchpress.com/page/about/CorporateTextAndDataMining
op_doi https://doi.org/10.1139/f01-167
container_title Canadian Journal of Fisheries and Aquatic Sciences
container_volume 58
container_issue 11
container_start_page 2284
op_container_end_page 2297
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