NMR-based metabolomics reveals compartmental metabolic heterogeneity in liver of Arctic char ( Salvelinusalpinus)

Metabolomics involves systematic study of low-molecular-mass metabolites in cells, tissues, or biofluids and is nowadays widely applied to characterize the physiological status of aquatic organisms under a set of conditions, such as disease and toxin exposure. Liver, an important metabolic center in...

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Published in:Canadian Journal of Zoology
Main Authors: Cheng, K., Wagner, L., Pickova, J., Moazzami, A.A.
Format: Article in Journal/Newspaper
Language:English
Published: Canadian Science Publishing 2016
Subjects:
Online Access:http://dx.doi.org/10.1139/cjz-2016-0051
http://www.nrcresearchpress.com/doi/full-xml/10.1139/cjz-2016-0051
http://www.nrcresearchpress.com/doi/pdf/10.1139/cjz-2016-0051
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spelling crcansciencepubl:10.1139/cjz-2016-0051 2024-09-15T18:33:06+00:00 NMR-based metabolomics reveals compartmental metabolic heterogeneity in liver of Arctic char ( Salvelinusalpinus) Cheng, K. Wagner, L. Pickova, J. Moazzami, A.A. 2016 http://dx.doi.org/10.1139/cjz-2016-0051 http://www.nrcresearchpress.com/doi/full-xml/10.1139/cjz-2016-0051 http://www.nrcresearchpress.com/doi/pdf/10.1139/cjz-2016-0051 en eng Canadian Science Publishing http://www.nrcresearchpress.com/page/about/CorporateTextAndDataMining Canadian Journal of Zoology volume 94, issue 9, page 665-669 ISSN 0008-4301 1480-3283 journal-article 2016 crcansciencepubl https://doi.org/10.1139/cjz-2016-0051 2024-06-27T04:11:00Z Metabolomics involves systematic study of low-molecular-mass metabolites in cells, tissues, or biofluids and is nowadays widely applied to characterize the physiological status of aquatic organisms under a set of conditions, such as disease and toxin exposure. Liver, an important metabolic center in the fish body, is often used for metabolomics analysis. Compared with the whole fish liver, the proportion of liver sample needed for metabolomics analysis is relatively small. The homogeneity of metabolites in liver is thus an important issue, especially for comparative studies and biomarker discovery. This study examined the homogeneity of the metabolic profile in liver of Arctic char (Salvelinus alpinus (L., 1758)) using a NMR-based metabolomics approach. For the analysis, whole liver samples were cut into four parts along the direction of gall bladder and at right angles to this, and metabolites in each part of the liver were extracted and analyzed by multivariate and univariate data analyses. Although the multivariate model was not significant due to variation within the data, the metabolic differences in polar portion of liver extract between the parts were seen, indicating non-homogeneity of Arctic char liver. Therefore, when sampling fish liver for further metabolomics studies, this heterogeneity should be taken into consideration. Article in Journal/Newspaper Salvelinus alpinus Canadian Science Publishing Canadian Journal of Zoology 94 9 665 669
institution Open Polar
collection Canadian Science Publishing
op_collection_id crcansciencepubl
language English
description Metabolomics involves systematic study of low-molecular-mass metabolites in cells, tissues, or biofluids and is nowadays widely applied to characterize the physiological status of aquatic organisms under a set of conditions, such as disease and toxin exposure. Liver, an important metabolic center in the fish body, is often used for metabolomics analysis. Compared with the whole fish liver, the proportion of liver sample needed for metabolomics analysis is relatively small. The homogeneity of metabolites in liver is thus an important issue, especially for comparative studies and biomarker discovery. This study examined the homogeneity of the metabolic profile in liver of Arctic char (Salvelinus alpinus (L., 1758)) using a NMR-based metabolomics approach. For the analysis, whole liver samples were cut into four parts along the direction of gall bladder and at right angles to this, and metabolites in each part of the liver were extracted and analyzed by multivariate and univariate data analyses. Although the multivariate model was not significant due to variation within the data, the metabolic differences in polar portion of liver extract between the parts were seen, indicating non-homogeneity of Arctic char liver. Therefore, when sampling fish liver for further metabolomics studies, this heterogeneity should be taken into consideration.
format Article in Journal/Newspaper
author Cheng, K.
Wagner, L.
Pickova, J.
Moazzami, A.A.
spellingShingle Cheng, K.
Wagner, L.
Pickova, J.
Moazzami, A.A.
NMR-based metabolomics reveals compartmental metabolic heterogeneity in liver of Arctic char ( Salvelinusalpinus)
author_facet Cheng, K.
Wagner, L.
Pickova, J.
Moazzami, A.A.
author_sort Cheng, K.
title NMR-based metabolomics reveals compartmental metabolic heterogeneity in liver of Arctic char ( Salvelinusalpinus)
title_short NMR-based metabolomics reveals compartmental metabolic heterogeneity in liver of Arctic char ( Salvelinusalpinus)
title_full NMR-based metabolomics reveals compartmental metabolic heterogeneity in liver of Arctic char ( Salvelinusalpinus)
title_fullStr NMR-based metabolomics reveals compartmental metabolic heterogeneity in liver of Arctic char ( Salvelinusalpinus)
title_full_unstemmed NMR-based metabolomics reveals compartmental metabolic heterogeneity in liver of Arctic char ( Salvelinusalpinus)
title_sort nmr-based metabolomics reveals compartmental metabolic heterogeneity in liver of arctic char ( salvelinusalpinus)
publisher Canadian Science Publishing
publishDate 2016
url http://dx.doi.org/10.1139/cjz-2016-0051
http://www.nrcresearchpress.com/doi/full-xml/10.1139/cjz-2016-0051
http://www.nrcresearchpress.com/doi/pdf/10.1139/cjz-2016-0051
genre Salvelinus alpinus
genre_facet Salvelinus alpinus
op_source Canadian Journal of Zoology
volume 94, issue 9, page 665-669
ISSN 0008-4301 1480-3283
op_rights http://www.nrcresearchpress.com/page/about/CorporateTextAndDataMining
op_doi https://doi.org/10.1139/cjz-2016-0051
container_title Canadian Journal of Zoology
container_volume 94
container_issue 9
container_start_page 665
op_container_end_page 669
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