On open access, data mining and plant conservation in the Circumpolar North with an online data example of the Herbarium, University of Alaska Museum of the North

With the advent of global online data sharing initiatives, few limits remain to using the treasure troves of museum data for biodiversity and conservation. The University of Alaska Museum Herbarium is fully online with metadata. Over 260 000 specimens representing the largest collection of Alaska pl...

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Published in:Arctic Science
Main Authors: Huettmann, Falk, Ickert-Bond, Stefanie M.
Format: Article in Journal/Newspaper
Language:English
Published: Canadian Science Publishing 2018
Subjects:
Online Access:http://dx.doi.org/10.1139/as-2016-0046
https://cdnsciencepub.com/doi/full-xml/10.1139/as-2016-0046
https://cdnsciencepub.com/doi/pdf/10.1139/as-2016-0046
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spelling crcansciencepubl:10.1139/as-2016-0046 2024-09-15T17:49:57+00:00 On open access, data mining and plant conservation in the Circumpolar North with an online data example of the Herbarium, University of Alaska Museum of the North Huettmann, Falk Ickert-Bond, Stefanie M. 2018 http://dx.doi.org/10.1139/as-2016-0046 https://cdnsciencepub.com/doi/full-xml/10.1139/as-2016-0046 https://cdnsciencepub.com/doi/pdf/10.1139/as-2016-0046 en eng Canadian Science Publishing http://www.nrcresearchpress.com/page/about/CorporateTextAndDataMining Arctic Science volume 4, issue 4, page 433-470 ISSN 2368-7460 2368-7460 journal-article 2018 crcansciencepubl https://doi.org/10.1139/as-2016-0046 2024-07-18T04:13:38Z With the advent of global online data sharing initiatives, few limits remain to using the treasure troves of museum data for biodiversity and conservation. The University of Alaska Museum Herbarium is fully online with metadata. Over 260 000 specimens representing the largest collection of Alaska plants anywhere can be data mined. We found that most specimens were collected through the National Park Service’s Inventory and Monitoring program at Denali National Park and Preserve. The majority of specimens were collected along roads, trails, coastline, or waterways, while high-altitude, remote, and pristine sampling locations are underrepresented still. Actual field efforts varied over the years, peaking in the late 1980s. From 1 to 400 specimens were collected per sampling location, and on average 40 species were obtained per collection event at a unique location. Our analysis presents a first data mining inventory of such open access data allowing for a rapid assessment, quality control, and predictive modeling involving automated high-performing machine learning algorithms and mapping analysis using open geographic information systems concepts. Our research sets a first template for more investigations in the Arctic and we briefly compare with selected specimen details from adjacent landscapes such as the Russian Far East, Canada, and the Circumpolar North. Article in Journal/Newspaper Arctic Alaska Canadian Science Publishing Arctic Science 4 4 433 470
institution Open Polar
collection Canadian Science Publishing
op_collection_id crcansciencepubl
language English
description With the advent of global online data sharing initiatives, few limits remain to using the treasure troves of museum data for biodiversity and conservation. The University of Alaska Museum Herbarium is fully online with metadata. Over 260 000 specimens representing the largest collection of Alaska plants anywhere can be data mined. We found that most specimens were collected through the National Park Service’s Inventory and Monitoring program at Denali National Park and Preserve. The majority of specimens were collected along roads, trails, coastline, or waterways, while high-altitude, remote, and pristine sampling locations are underrepresented still. Actual field efforts varied over the years, peaking in the late 1980s. From 1 to 400 specimens were collected per sampling location, and on average 40 species were obtained per collection event at a unique location. Our analysis presents a first data mining inventory of such open access data allowing for a rapid assessment, quality control, and predictive modeling involving automated high-performing machine learning algorithms and mapping analysis using open geographic information systems concepts. Our research sets a first template for more investigations in the Arctic and we briefly compare with selected specimen details from adjacent landscapes such as the Russian Far East, Canada, and the Circumpolar North.
format Article in Journal/Newspaper
author Huettmann, Falk
Ickert-Bond, Stefanie M.
spellingShingle Huettmann, Falk
Ickert-Bond, Stefanie M.
On open access, data mining and plant conservation in the Circumpolar North with an online data example of the Herbarium, University of Alaska Museum of the North
author_facet Huettmann, Falk
Ickert-Bond, Stefanie M.
author_sort Huettmann, Falk
title On open access, data mining and plant conservation in the Circumpolar North with an online data example of the Herbarium, University of Alaska Museum of the North
title_short On open access, data mining and plant conservation in the Circumpolar North with an online data example of the Herbarium, University of Alaska Museum of the North
title_full On open access, data mining and plant conservation in the Circumpolar North with an online data example of the Herbarium, University of Alaska Museum of the North
title_fullStr On open access, data mining and plant conservation in the Circumpolar North with an online data example of the Herbarium, University of Alaska Museum of the North
title_full_unstemmed On open access, data mining and plant conservation in the Circumpolar North with an online data example of the Herbarium, University of Alaska Museum of the North
title_sort on open access, data mining and plant conservation in the circumpolar north with an online data example of the herbarium, university of alaska museum of the north
publisher Canadian Science Publishing
publishDate 2018
url http://dx.doi.org/10.1139/as-2016-0046
https://cdnsciencepub.com/doi/full-xml/10.1139/as-2016-0046
https://cdnsciencepub.com/doi/pdf/10.1139/as-2016-0046
genre Arctic
Alaska
genre_facet Arctic
Alaska
op_source Arctic Science
volume 4, issue 4, page 433-470
ISSN 2368-7460 2368-7460
op_rights http://www.nrcresearchpress.com/page/about/CorporateTextAndDataMining
op_doi https://doi.org/10.1139/as-2016-0046
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