Taxonomy 2.0: computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory

Abstract Species inventories are essential to the implementation of conservation policies to mitigate biodiversity loss and maintain ecosystem services and their value to the society. This is particularly topical with respect to climate change and direct anthropogenic effects on Antarctic biodiversi...

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Published in:Antarctic Science
Main Authors: Saucède, Thomas, Eléaume, Marc, Jossart, Quentin, Moreau, Camille, Downey, Rachel, Bax, Narissa, Sands, Chester, Mercado, Borja, Gallut, Cyril, Vignes-Lebbe, Régine
Format: Article in Journal/Newspaper
Language:English
Published: Cambridge University Press (CUP) 2020
Subjects:
Online Access:http://dx.doi.org/10.1017/s0954102020000462
https://www.cambridge.org/core/services/aop-cambridge-core/content/view/S0954102020000462
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spelling crcambridgeupr:10.1017/s0954102020000462 2024-03-03T08:38:21+00:00 Taxonomy 2.0: computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory Saucède, Thomas Eléaume, Marc Jossart, Quentin Moreau, Camille Downey, Rachel Bax, Narissa Sands, Chester Mercado, Borja Gallut, Cyril Vignes-Lebbe, Régine 2020 http://dx.doi.org/10.1017/s0954102020000462 https://www.cambridge.org/core/services/aop-cambridge-core/content/view/S0954102020000462 en eng Cambridge University Press (CUP) https://www.cambridge.org/core/terms Antarctic Science volume 33, issue 1, page 39-51 ISSN 0954-1020 1365-2079 Geology Ecology, Evolution, Behavior and Systematics Oceanography journal-article 2020 crcambridgeupr https://doi.org/10.1017/s0954102020000462 2024-02-08T08:40:59Z Abstract Species inventories are essential to the implementation of conservation policies to mitigate biodiversity loss and maintain ecosystem services and their value to the society. This is particularly topical with respect to climate change and direct anthropogenic effects on Antarctic biodiversity, with the identification of the most at-risk taxa and geographical areas becoming a priority. Identification tools are often neglected and considered helpful only for taxonomists. However, the development of new online information technologies and computer-aided identification tools provides an opportunity to promote them to a wider audience, especially considering the emerging generation of scientists who apply an integrative approach to taxonomy. This paper aims to clarify essential concepts and provide convenient and accessible tools, tips and suggested systems to use and develop knowledge bases (KBs). The software Xper3 was selected as an example of a user-friendly KB management system to give a general overview of existing tools and functionalities through two applications: the ‘Antarctic Echinoids’ and ‘Odontasteridae Southern Ocean (Asteroids)’ KBs. We highlight the advantages provided by KBs over more classical tools, and future potential uses are highlighted, including the production of field guides to aid in the compilation of species inventories for biodiversity conservation purposes. Article in Journal/Newspaper Antarc* Antarctic Antarctic Science Southern Ocean Cambridge University Press Antarctic Southern Ocean The Antarctic Antarctic Science 33 1 39 51
institution Open Polar
collection Cambridge University Press
op_collection_id crcambridgeupr
language English
topic Geology
Ecology, Evolution, Behavior and Systematics
Oceanography
spellingShingle Geology
Ecology, Evolution, Behavior and Systematics
Oceanography
Saucède, Thomas
Eléaume, Marc
Jossart, Quentin
Moreau, Camille
Downey, Rachel
Bax, Narissa
Sands, Chester
Mercado, Borja
Gallut, Cyril
Vignes-Lebbe, Régine
Taxonomy 2.0: computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory
topic_facet Geology
Ecology, Evolution, Behavior and Systematics
Oceanography
description Abstract Species inventories are essential to the implementation of conservation policies to mitigate biodiversity loss and maintain ecosystem services and their value to the society. This is particularly topical with respect to climate change and direct anthropogenic effects on Antarctic biodiversity, with the identification of the most at-risk taxa and geographical areas becoming a priority. Identification tools are often neglected and considered helpful only for taxonomists. However, the development of new online information technologies and computer-aided identification tools provides an opportunity to promote them to a wider audience, especially considering the emerging generation of scientists who apply an integrative approach to taxonomy. This paper aims to clarify essential concepts and provide convenient and accessible tools, tips and suggested systems to use and develop knowledge bases (KBs). The software Xper3 was selected as an example of a user-friendly KB management system to give a general overview of existing tools and functionalities through two applications: the ‘Antarctic Echinoids’ and ‘Odontasteridae Southern Ocean (Asteroids)’ KBs. We highlight the advantages provided by KBs over more classical tools, and future potential uses are highlighted, including the production of field guides to aid in the compilation of species inventories for biodiversity conservation purposes.
format Article in Journal/Newspaper
author Saucède, Thomas
Eléaume, Marc
Jossart, Quentin
Moreau, Camille
Downey, Rachel
Bax, Narissa
Sands, Chester
Mercado, Borja
Gallut, Cyril
Vignes-Lebbe, Régine
author_facet Saucède, Thomas
Eléaume, Marc
Jossart, Quentin
Moreau, Camille
Downey, Rachel
Bax, Narissa
Sands, Chester
Mercado, Borja
Gallut, Cyril
Vignes-Lebbe, Régine
author_sort Saucède, Thomas
title Taxonomy 2.0: computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory
title_short Taxonomy 2.0: computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory
title_full Taxonomy 2.0: computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory
title_fullStr Taxonomy 2.0: computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory
title_full_unstemmed Taxonomy 2.0: computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory
title_sort taxonomy 2.0: computer-aided identification tools to assist antarctic biologists in the field and in the laboratory
publisher Cambridge University Press (CUP)
publishDate 2020
url http://dx.doi.org/10.1017/s0954102020000462
https://www.cambridge.org/core/services/aop-cambridge-core/content/view/S0954102020000462
geographic Antarctic
Southern Ocean
The Antarctic
geographic_facet Antarctic
Southern Ocean
The Antarctic
genre Antarc*
Antarctic
Antarctic Science
Southern Ocean
genre_facet Antarc*
Antarctic
Antarctic Science
Southern Ocean
op_source Antarctic Science
volume 33, issue 1, page 39-51
ISSN 0954-1020 1365-2079
op_rights https://www.cambridge.org/core/terms
op_doi https://doi.org/10.1017/s0954102020000462
container_title Antarctic Science
container_volume 33
container_issue 1
container_start_page 39
op_container_end_page 51
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