Two genetic and ecological groups of Nostoc commune in Victoria Land, Antarctica, revealed by AFLP analysis

Microscopy, DNA sequencing, and amplified fragment length polymorphism (AFLP) were used to examine variation within Nostoc commune from collections between 72 and 78°S in Victoria Land, Antarctica. Although there is considerable bias of collected material towards southern latitudes, and this materia...

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Published in:Antarctic Science
Main Authors: Novis, Phil M., Smissen, Rob D.
Format: Article in Journal/Newspaper
Language:English
Published: Cambridge University Press (CUP) 2006
Subjects:
Online Access:http://dx.doi.org/10.1017/s0954102006000617
https://www.cambridge.org/core/services/aop-cambridge-core/content/view/S0954102006000617
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spelling crcambridgeupr:10.1017/s0954102006000617 2024-10-13T14:03:17+00:00 Two genetic and ecological groups of Nostoc commune in Victoria Land, Antarctica, revealed by AFLP analysis Novis, Phil M. Smissen, Rob D. 2006 http://dx.doi.org/10.1017/s0954102006000617 https://www.cambridge.org/core/services/aop-cambridge-core/content/view/S0954102006000617 en eng Cambridge University Press (CUP) https://www.cambridge.org/core/terms Antarctic Science volume 18, issue 4, page 573-581 ISSN 0954-1020 1365-2079 journal-article 2006 crcambridgeupr https://doi.org/10.1017/s0954102006000617 2024-09-18T04:02:14Z Microscopy, DNA sequencing, and amplified fragment length polymorphism (AFLP) were used to examine variation within Nostoc commune from collections between 72 and 78°S in Victoria Land, Antarctica. Although there is considerable bias of collected material towards southern latitudes, and this material varies greatly in age (collected between 1984 and 2004), an important new phylogeographic pattern was found. DNA sequencing of the tRNA leu (UAA) region, used recently to define form species N. commune , revealed little variation between collections. AFLP analysis, however, split the collected material according to habitat (irrigated soil communities versus ponds), rather than latitude. These results suggest that environmental factors linked to latitude are not the greatest drivers of genetic variation in Victoria Land. These may operate at a lower level but would require intensive sampling within narrowly defined habitat types at a range of latitudes to uncover. We advocate extensive sampling across local environmental gradients based on water availability, comparative culturing, and development of sequence characterised amplified regions (SCARs) across a range of latitudes in future seasons of the Latitudinal Gradient Project. Article in Journal/Newspaper Antarc* Antarctic Science Antarctica Victoria Land Cambridge University Press Victoria Land Antarctic Science 18 4 573 581
institution Open Polar
collection Cambridge University Press
op_collection_id crcambridgeupr
language English
description Microscopy, DNA sequencing, and amplified fragment length polymorphism (AFLP) were used to examine variation within Nostoc commune from collections between 72 and 78°S in Victoria Land, Antarctica. Although there is considerable bias of collected material towards southern latitudes, and this material varies greatly in age (collected between 1984 and 2004), an important new phylogeographic pattern was found. DNA sequencing of the tRNA leu (UAA) region, used recently to define form species N. commune , revealed little variation between collections. AFLP analysis, however, split the collected material according to habitat (irrigated soil communities versus ponds), rather than latitude. These results suggest that environmental factors linked to latitude are not the greatest drivers of genetic variation in Victoria Land. These may operate at a lower level but would require intensive sampling within narrowly defined habitat types at a range of latitudes to uncover. We advocate extensive sampling across local environmental gradients based on water availability, comparative culturing, and development of sequence characterised amplified regions (SCARs) across a range of latitudes in future seasons of the Latitudinal Gradient Project.
format Article in Journal/Newspaper
author Novis, Phil M.
Smissen, Rob D.
spellingShingle Novis, Phil M.
Smissen, Rob D.
Two genetic and ecological groups of Nostoc commune in Victoria Land, Antarctica, revealed by AFLP analysis
author_facet Novis, Phil M.
Smissen, Rob D.
author_sort Novis, Phil M.
title Two genetic and ecological groups of Nostoc commune in Victoria Land, Antarctica, revealed by AFLP analysis
title_short Two genetic and ecological groups of Nostoc commune in Victoria Land, Antarctica, revealed by AFLP analysis
title_full Two genetic and ecological groups of Nostoc commune in Victoria Land, Antarctica, revealed by AFLP analysis
title_fullStr Two genetic and ecological groups of Nostoc commune in Victoria Land, Antarctica, revealed by AFLP analysis
title_full_unstemmed Two genetic and ecological groups of Nostoc commune in Victoria Land, Antarctica, revealed by AFLP analysis
title_sort two genetic and ecological groups of nostoc commune in victoria land, antarctica, revealed by aflp analysis
publisher Cambridge University Press (CUP)
publishDate 2006
url http://dx.doi.org/10.1017/s0954102006000617
https://www.cambridge.org/core/services/aop-cambridge-core/content/view/S0954102006000617
geographic Victoria Land
geographic_facet Victoria Land
genre Antarc*
Antarctic Science
Antarctica
Victoria Land
genre_facet Antarc*
Antarctic Science
Antarctica
Victoria Land
op_source Antarctic Science
volume 18, issue 4, page 573-581
ISSN 0954-1020 1365-2079
op_rights https://www.cambridge.org/core/terms
op_doi https://doi.org/10.1017/s0954102006000617
container_title Antarctic Science
container_volume 18
container_issue 4
container_start_page 573
op_container_end_page 581
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