Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils

This study presents the use of relaxed molecular clock methods to infer the dates of divergence between Panagrolaimus species. Autocorrelated relaxed tree methods, combined with well characterised fossil calibration dates, yield estimates of nematode divergence dates in accordance with the palaeonto...

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Published in:Nematology
Main Authors: McGill, Lorraine M., Fitzpatrick, David A., Pisani, Davide, Burnell, Ann M.
Format: Article in Journal/Newspaper
Language:unknown
Published: Brill 2017
Subjects:
Online Access:http://dx.doi.org/10.1163/15685411-00003096
https://brill.com/view/journals/nemy/19/8/article-p899_4.xml
https://data.brill.com/files/journals/15685411_019_08_s004_text.pdf
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spelling crbrillap:10.1163/15685411-00003096 2024-03-03T08:37:17+00:00 Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils McGill, Lorraine M. Fitzpatrick, David A. Pisani, Davide Burnell, Ann M. 2017 http://dx.doi.org/10.1163/15685411-00003096 https://brill.com/view/journals/nemy/19/8/article-p899_4.xml https://data.brill.com/files/journals/15685411_019_08_s004_text.pdf unknown Brill Nematology volume 19, issue 8, page 899-913 ISSN 1388-5545 1568-5411 Agronomy and Crop Science Ecology, Evolution, Behavior and Systematics journal-article 2017 crbrillap https://doi.org/10.1163/15685411-00003096 2024-02-07T10:52:41Z This study presents the use of relaxed molecular clock methods to infer the dates of divergence between Panagrolaimus species. Autocorrelated relaxed tree methods, combined with well characterised fossil calibration dates, yield estimates of nematode divergence dates in accordance with the palaeontological age of fossil ascarid eggs and with the previously estimated date of 18 Ma (range 11.6 to 29.9 Ma) for the divergence of the Caenorhabditis lineage. Our data indicate that Panagrolaimus davidi from Antarctica separated ca 21.98 Ma from its currently known, most closely related strain. Thus, P. davidi may have existed in Antarctica prior to the Last Glacial Maximum, although this seems unlikely as it shares physiological and life history traits with closely related nematodes from temperate climates. These traits may have facilitated colonisation of Antarctica by P. davidi after the quaternary glaciation, analogous to the colonisation of Surtsey Island, Iceland, by P. superbus after its volcanic formation. This study demonstrates that autocorrelated relaxed tree methods combined with well characterised fossil calibration dates may be used as a method to estimate the divergence dates within nematodes in order to gain insight into their evolutionary history. Article in Journal/Newspaper Antarc* Antarctica Iceland Surtsey Brill Surtsey ENVELOPE(-20.608,-20.608,63.301,63.301) Nematology 19 8 899 913
institution Open Polar
collection Brill
op_collection_id crbrillap
language unknown
topic Agronomy and Crop Science
Ecology, Evolution, Behavior and Systematics
spellingShingle Agronomy and Crop Science
Ecology, Evolution, Behavior and Systematics
McGill, Lorraine M.
Fitzpatrick, David A.
Pisani, Davide
Burnell, Ann M.
Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils
topic_facet Agronomy and Crop Science
Ecology, Evolution, Behavior and Systematics
description This study presents the use of relaxed molecular clock methods to infer the dates of divergence between Panagrolaimus species. Autocorrelated relaxed tree methods, combined with well characterised fossil calibration dates, yield estimates of nematode divergence dates in accordance with the palaeontological age of fossil ascarid eggs and with the previously estimated date of 18 Ma (range 11.6 to 29.9 Ma) for the divergence of the Caenorhabditis lineage. Our data indicate that Panagrolaimus davidi from Antarctica separated ca 21.98 Ma from its currently known, most closely related strain. Thus, P. davidi may have existed in Antarctica prior to the Last Glacial Maximum, although this seems unlikely as it shares physiological and life history traits with closely related nematodes from temperate climates. These traits may have facilitated colonisation of Antarctica by P. davidi after the quaternary glaciation, analogous to the colonisation of Surtsey Island, Iceland, by P. superbus after its volcanic formation. This study demonstrates that autocorrelated relaxed tree methods combined with well characterised fossil calibration dates may be used as a method to estimate the divergence dates within nematodes in order to gain insight into their evolutionary history.
format Article in Journal/Newspaper
author McGill, Lorraine M.
Fitzpatrick, David A.
Pisani, Davide
Burnell, Ann M.
author_facet McGill, Lorraine M.
Fitzpatrick, David A.
Pisani, Davide
Burnell, Ann M.
author_sort McGill, Lorraine M.
title Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils
title_short Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils
title_full Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils
title_fullStr Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils
title_full_unstemmed Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils
title_sort estimation of phylogenetic divergence times in panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils
publisher Brill
publishDate 2017
url http://dx.doi.org/10.1163/15685411-00003096
https://brill.com/view/journals/nemy/19/8/article-p899_4.xml
https://data.brill.com/files/journals/15685411_019_08_s004_text.pdf
long_lat ENVELOPE(-20.608,-20.608,63.301,63.301)
geographic Surtsey
geographic_facet Surtsey
genre Antarc*
Antarctica
Iceland
Surtsey
genre_facet Antarc*
Antarctica
Iceland
Surtsey
op_source Nematology
volume 19, issue 8, page 899-913
ISSN 1388-5545 1568-5411
op_doi https://doi.org/10.1163/15685411-00003096
container_title Nematology
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container_issue 8
container_start_page 899
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