Viral Ecogenomics of Arctic Cryopeg Brine and Sea Ice

This study explores viral community structure and function in remote and extreme Arctic environments, including subzero brines within marine layers of permafrost and sea ice, using a modern viral ecogenomics toolkit for the first time. In addition to providing foundational data sets for these climat...

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Published in:mSystems
Main Authors: Zhong, Zhi-Ping, Rapp, Josephine Z., Wainaina, James M., Solonenko, Natalie E., Maughan, Heather, Carpenter, Shelly D., Cooper, Zachary S., Jang, Ho Bin, Bolduc, Benjamin, Deming, Jody W., Sullivan, Matthew B.
Other Authors: Emerson, Joanne B., U.S. Department of Energy, Gordon and Betty Moore Foundation, OSU | Byrd Polar and Climate Research Center, Ohio State University
Format: Article in Journal/Newspaper
Language:English
Published: American Society for Microbiology 2020
Subjects:
Ice
Online Access:http://dx.doi.org/10.1128/msystems.00246-20
https://journals.asm.org/doi/pdf/10.1128/msystems.00246-20
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spelling crasmicro:10.1128/msystems.00246-20 2024-09-30T14:30:04+00:00 Viral Ecogenomics of Arctic Cryopeg Brine and Sea Ice Zhong, Zhi-Ping Rapp, Josephine Z. Wainaina, James M. Solonenko, Natalie E. Maughan, Heather Carpenter, Shelly D. Cooper, Zachary S. Jang, Ho Bin Bolduc, Benjamin Deming, Jody W. Sullivan, Matthew B. Emerson, Joanne B. U.S. Department of Energy Gordon and Betty Moore Foundation OSU | Byrd Polar and Climate Research Center, Ohio State University 2020 http://dx.doi.org/10.1128/msystems.00246-20 https://journals.asm.org/doi/pdf/10.1128/msystems.00246-20 en eng American Society for Microbiology https://creativecommons.org/licenses/by/4.0/ https://journals.asm.org/non-commercial-tdm-license mSystems volume 5, issue 3 ISSN 2379-5077 journal-article 2020 crasmicro https://doi.org/10.1128/msystems.00246-20 2024-09-17T04:08:20Z This study explores viral community structure and function in remote and extreme Arctic environments, including subzero brines within marine layers of permafrost and sea ice, using a modern viral ecogenomics toolkit for the first time. In addition to providing foundational data sets for these climate-threatened habitats, we found evidence that the viruses had habitat specificity, infected dominant microbial hosts, encoded host-derived metabolic genes, and mediated horizontal gene transfer among hosts. These results advance our understanding of the virosphere and how viruses influence extreme ecosystems. More broadly, the evidence that virally mediated gene transfers may be limited by host range in these extreme habitats contributes to a mechanistic understanding of genetic exchange among microbes under stressful conditions in other systems. Article in Journal/Newspaper Arctic Ice permafrost Sea ice ASM Journals (American Society for Microbiology) Arctic mSystems 5 3
institution Open Polar
collection ASM Journals (American Society for Microbiology)
op_collection_id crasmicro
language English
description This study explores viral community structure and function in remote and extreme Arctic environments, including subzero brines within marine layers of permafrost and sea ice, using a modern viral ecogenomics toolkit for the first time. In addition to providing foundational data sets for these climate-threatened habitats, we found evidence that the viruses had habitat specificity, infected dominant microbial hosts, encoded host-derived metabolic genes, and mediated horizontal gene transfer among hosts. These results advance our understanding of the virosphere and how viruses influence extreme ecosystems. More broadly, the evidence that virally mediated gene transfers may be limited by host range in these extreme habitats contributes to a mechanistic understanding of genetic exchange among microbes under stressful conditions in other systems.
author2 Emerson, Joanne B.
U.S. Department of Energy
Gordon and Betty Moore Foundation
OSU | Byrd Polar and Climate Research Center, Ohio State University
format Article in Journal/Newspaper
author Zhong, Zhi-Ping
Rapp, Josephine Z.
Wainaina, James M.
Solonenko, Natalie E.
Maughan, Heather
Carpenter, Shelly D.
Cooper, Zachary S.
Jang, Ho Bin
Bolduc, Benjamin
Deming, Jody W.
Sullivan, Matthew B.
spellingShingle Zhong, Zhi-Ping
Rapp, Josephine Z.
Wainaina, James M.
Solonenko, Natalie E.
Maughan, Heather
Carpenter, Shelly D.
Cooper, Zachary S.
Jang, Ho Bin
Bolduc, Benjamin
Deming, Jody W.
Sullivan, Matthew B.
Viral Ecogenomics of Arctic Cryopeg Brine and Sea Ice
author_facet Zhong, Zhi-Ping
Rapp, Josephine Z.
Wainaina, James M.
Solonenko, Natalie E.
Maughan, Heather
Carpenter, Shelly D.
Cooper, Zachary S.
Jang, Ho Bin
Bolduc, Benjamin
Deming, Jody W.
Sullivan, Matthew B.
author_sort Zhong, Zhi-Ping
title Viral Ecogenomics of Arctic Cryopeg Brine and Sea Ice
title_short Viral Ecogenomics of Arctic Cryopeg Brine and Sea Ice
title_full Viral Ecogenomics of Arctic Cryopeg Brine and Sea Ice
title_fullStr Viral Ecogenomics of Arctic Cryopeg Brine and Sea Ice
title_full_unstemmed Viral Ecogenomics of Arctic Cryopeg Brine and Sea Ice
title_sort viral ecogenomics of arctic cryopeg brine and sea ice
publisher American Society for Microbiology
publishDate 2020
url http://dx.doi.org/10.1128/msystems.00246-20
https://journals.asm.org/doi/pdf/10.1128/msystems.00246-20
geographic Arctic
geographic_facet Arctic
genre Arctic
Ice
permafrost
Sea ice
genre_facet Arctic
Ice
permafrost
Sea ice
op_source mSystems
volume 5, issue 3
ISSN 2379-5077
op_rights https://creativecommons.org/licenses/by/4.0/
https://journals.asm.org/non-commercial-tdm-license
op_doi https://doi.org/10.1128/msystems.00246-20
container_title mSystems
container_volume 5
container_issue 3
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