Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, “Candidatus Nitrosopumilus koreensis” AR1, from Marine Sediment
ABSTRACT Ammonia-oxidizing archaea (AOA) are ubiquitous in various marine environments and play important roles in the global nitrogen and carbon cycles. We here present a high-quality draft genome sequence of an ammonia-oxidizing archaeon, “ Candidatus Nitrosopumilus koreensis” AR1, which was found...
Published in: | Journal of Bacteriology |
---|---|
Main Authors: | , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
American Society for Microbiology
2012
|
Subjects: | |
Online Access: | http://dx.doi.org/10.1128/jb.01857-12 https://journals.asm.org/doi/pdf/10.1128/JB.01857-12 |
id |
crasmicro:10.1128/jb.01857-12 |
---|---|
record_format |
openpolar |
spelling |
crasmicro:10.1128/jb.01857-12 2024-09-30T14:30:37+00:00 Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, “Candidatus Nitrosopumilus koreensis” AR1, from Marine Sediment Park, Soo-Je Kim, Jong-Geol Jung, Man-Young Kim, So-Jeong Cha, In-Tae Kwon, KaeKyoung Lee, Jung-Hyun Rhee, Sung-Keun 2012 http://dx.doi.org/10.1128/jb.01857-12 https://journals.asm.org/doi/pdf/10.1128/JB.01857-12 en eng American Society for Microbiology https://journals.asm.org/non-commercial-tdm-license Journal of Bacteriology volume 194, issue 24, page 6940-6941 ISSN 0021-9193 1098-5530 journal-article 2012 crasmicro https://doi.org/10.1128/jb.01857-12 2024-09-17T04:08:03Z ABSTRACT Ammonia-oxidizing archaea (AOA) are ubiquitous in various marine environments and play important roles in the global nitrogen and carbon cycles. We here present a high-quality draft genome sequence of an ammonia-oxidizing archaeon, “ Candidatus Nitrosopumilus koreensis” AR1, which was found to dominate an ammonia-oxidizing enrichment culture in marine sediment off Svalbard, the Arctic Circle. Despite a significant number of nonoverlapping genes (ca. 30%), similarities of this strain to “ Candidatus Nitrosopumilus maritimus” were revealed by core genes for archaeal ammonia oxidation and carbon fixation, G+C content, and extensive synteny conservation. Article in Journal/Newspaper Arctic Svalbard ASM Journals (American Society for Microbiology) Arctic Svalbard Journal of Bacteriology 194 24 6940 6941 |
institution |
Open Polar |
collection |
ASM Journals (American Society for Microbiology) |
op_collection_id |
crasmicro |
language |
English |
description |
ABSTRACT Ammonia-oxidizing archaea (AOA) are ubiquitous in various marine environments and play important roles in the global nitrogen and carbon cycles. We here present a high-quality draft genome sequence of an ammonia-oxidizing archaeon, “ Candidatus Nitrosopumilus koreensis” AR1, which was found to dominate an ammonia-oxidizing enrichment culture in marine sediment off Svalbard, the Arctic Circle. Despite a significant number of nonoverlapping genes (ca. 30%), similarities of this strain to “ Candidatus Nitrosopumilus maritimus” were revealed by core genes for archaeal ammonia oxidation and carbon fixation, G+C content, and extensive synteny conservation. |
format |
Article in Journal/Newspaper |
author |
Park, Soo-Je Kim, Jong-Geol Jung, Man-Young Kim, So-Jeong Cha, In-Tae Kwon, KaeKyoung Lee, Jung-Hyun Rhee, Sung-Keun |
spellingShingle |
Park, Soo-Je Kim, Jong-Geol Jung, Man-Young Kim, So-Jeong Cha, In-Tae Kwon, KaeKyoung Lee, Jung-Hyun Rhee, Sung-Keun Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, “Candidatus Nitrosopumilus koreensis” AR1, from Marine Sediment |
author_facet |
Park, Soo-Je Kim, Jong-Geol Jung, Man-Young Kim, So-Jeong Cha, In-Tae Kwon, KaeKyoung Lee, Jung-Hyun Rhee, Sung-Keun |
author_sort |
Park, Soo-Je |
title |
Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, “Candidatus Nitrosopumilus koreensis” AR1, from Marine Sediment |
title_short |
Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, “Candidatus Nitrosopumilus koreensis” AR1, from Marine Sediment |
title_full |
Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, “Candidatus Nitrosopumilus koreensis” AR1, from Marine Sediment |
title_fullStr |
Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, “Candidatus Nitrosopumilus koreensis” AR1, from Marine Sediment |
title_full_unstemmed |
Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, “Candidatus Nitrosopumilus koreensis” AR1, from Marine Sediment |
title_sort |
draft genome sequence of an ammonia-oxidizing archaeon, “candidatus nitrosopumilus koreensis” ar1, from marine sediment |
publisher |
American Society for Microbiology |
publishDate |
2012 |
url |
http://dx.doi.org/10.1128/jb.01857-12 https://journals.asm.org/doi/pdf/10.1128/JB.01857-12 |
geographic |
Arctic Svalbard |
geographic_facet |
Arctic Svalbard |
genre |
Arctic Svalbard |
genre_facet |
Arctic Svalbard |
op_source |
Journal of Bacteriology volume 194, issue 24, page 6940-6941 ISSN 0021-9193 1098-5530 |
op_rights |
https://journals.asm.org/non-commercial-tdm-license |
op_doi |
https://doi.org/10.1128/jb.01857-12 |
container_title |
Journal of Bacteriology |
container_volume |
194 |
container_issue |
24 |
container_start_page |
6940 |
op_container_end_page |
6941 |
_version_ |
1811635486581587968 |