Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions

Methane hydrates are important from a scientific and industrial perspective, and form by nucleation and growth from a supersaturated aqueous solution of methane. Molecular simulation is able to shed light on the process of homogeneous nucleation of hydrates, using straightforward molecular dynamics...

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Published in:The Journal of Chemical Physics
Main Authors: Arjun, A., Bolhuis, Peter G.
Other Authors: Nederlandse Organisatie voor Wetenschappelijk Onderzoek
Format: Article in Journal/Newspaper
Language:English
Published: AIP Publishing 2023
Subjects:
Online Access:http://dx.doi.org/10.1063/5.0124852
https://pubs.aip.org/aip/jcp/article-pdf/doi/10.1063/5.0124852/18191694/044504_1_5.0124852.pdf
id craippubl:10.1063/5.0124852
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spelling craippubl:10.1063/5.0124852 2024-04-28T08:28:23+00:00 Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions Arjun, A. Bolhuis, Peter G. Nederlandse Organisatie voor Wetenschappelijk Onderzoek 2023 http://dx.doi.org/10.1063/5.0124852 https://pubs.aip.org/aip/jcp/article-pdf/doi/10.1063/5.0124852/18191694/044504_1_5.0124852.pdf en eng AIP Publishing The Journal of Chemical Physics volume 158, issue 4 ISSN 0021-9606 1089-7690 Physical and Theoretical Chemistry General Physics and Astronomy journal-article 2023 craippubl https://doi.org/10.1063/5.0124852 2024-04-09T06:44:12Z Methane hydrates are important from a scientific and industrial perspective, and form by nucleation and growth from a supersaturated aqueous solution of methane. Molecular simulation is able to shed light on the process of homogeneous nucleation of hydrates, using straightforward molecular dynamics or rare event enhanced sampling techniques with atomistic and coarse grained force fields. In our previous work [Arjun, T. A. Berendsen, and P. G. Bolhuis, Proc. Natl. Acad. Sci. U. S. A. 116, 19305 (2019)], we performed transition path sampling (TPS) simulations using all atom force fields under moderate driving forces at high pressure, which enabled unbiased atomistic insight into the formation of methane hydrates. The supersaturation in these simulations was influenced by the Laplace pressure induced by the spherical gas reservoir. Here, we investigate the effect of removing this influence. Focusing on the supercooled, supersaturated regime to keep the system size tractable, our TPS simulations indicate that nuclei form amorphous structures below roughly 260 K and crystalline sI structures above 260 K. For these temperatures, the average transition path lengths are significantly longer than in our previous study, pushing the boundaries of what can be achieved with TPS. The temperature to observe a critical nucleus of certain size was roughly 20 K lower compared to a spherical reservoir due to the lower concentration of methane in the solution, yielding a reduced driving force. We analyze the TPS results using a model based on classical nucleation theory. The corresponding free energy barriers are estimated and found to be consistent with previous predictions, thus adding to the overall picture of the hydrate formation process. Article in Journal/Newspaper Methane hydrate AIP Publishing The Journal of Chemical Physics 158 4 044504
institution Open Polar
collection AIP Publishing
op_collection_id craippubl
language English
topic Physical and Theoretical Chemistry
General Physics and Astronomy
spellingShingle Physical and Theoretical Chemistry
General Physics and Astronomy
Arjun, A.
Bolhuis, Peter G.
Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions
topic_facet Physical and Theoretical Chemistry
General Physics and Astronomy
description Methane hydrates are important from a scientific and industrial perspective, and form by nucleation and growth from a supersaturated aqueous solution of methane. Molecular simulation is able to shed light on the process of homogeneous nucleation of hydrates, using straightforward molecular dynamics or rare event enhanced sampling techniques with atomistic and coarse grained force fields. In our previous work [Arjun, T. A. Berendsen, and P. G. Bolhuis, Proc. Natl. Acad. Sci. U. S. A. 116, 19305 (2019)], we performed transition path sampling (TPS) simulations using all atom force fields under moderate driving forces at high pressure, which enabled unbiased atomistic insight into the formation of methane hydrates. The supersaturation in these simulations was influenced by the Laplace pressure induced by the spherical gas reservoir. Here, we investigate the effect of removing this influence. Focusing on the supercooled, supersaturated regime to keep the system size tractable, our TPS simulations indicate that nuclei form amorphous structures below roughly 260 K and crystalline sI structures above 260 K. For these temperatures, the average transition path lengths are significantly longer than in our previous study, pushing the boundaries of what can be achieved with TPS. The temperature to observe a critical nucleus of certain size was roughly 20 K lower compared to a spherical reservoir due to the lower concentration of methane in the solution, yielding a reduced driving force. We analyze the TPS results using a model based on classical nucleation theory. The corresponding free energy barriers are estimated and found to be consistent with previous predictions, thus adding to the overall picture of the hydrate formation process.
author2 Nederlandse Organisatie voor Wetenschappelijk Onderzoek
format Article in Journal/Newspaper
author Arjun, A.
Bolhuis, Peter G.
author_facet Arjun, A.
Bolhuis, Peter G.
author_sort Arjun, A.
title Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions
title_short Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions
title_full Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions
title_fullStr Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions
title_full_unstemmed Homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions
title_sort homogeneous nucleation of crystalline methane hydrate in molecular dynamics transition paths sampled under realistic conditions
publisher AIP Publishing
publishDate 2023
url http://dx.doi.org/10.1063/5.0124852
https://pubs.aip.org/aip/jcp/article-pdf/doi/10.1063/5.0124852/18191694/044504_1_5.0124852.pdf
genre Methane hydrate
genre_facet Methane hydrate
op_source The Journal of Chemical Physics
volume 158, issue 4
ISSN 0021-9606 1089-7690
op_doi https://doi.org/10.1063/5.0124852
container_title The Journal of Chemical Physics
container_volume 158
container_issue 4
container_start_page 044504
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