Dissociation of carbonic acid: Gas phase energetics and mechanism from ab initio metadynamics simulations

A comprehensive metadynamics study of the energetics, stability, conformational changes, and mechanism of dissociation of gas phase carbonic acid, H2CO3, yields significant new insight into these reactions. The equilibrium geometries, vibrational frequencies, and conformer energies calculated using...

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Published in:The Journal of Chemical Physics
Main Authors: Kumar, P. Padma, Kalinichev, Andrey G., Kirkpatrick, R. James
Format: Article in Journal/Newspaper
Language:English
Published: AIP Publishing 2007
Subjects:
Online Access:http://dx.doi.org/10.1063/1.2741552
https://pubs.aip.org/aip/jcp/article-pdf/doi/10.1063/1.2741552/13118933/204315_1_online.pdf
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spelling craippubl:10.1063/1.2741552 2024-09-15T18:01:36+00:00 Dissociation of carbonic acid: Gas phase energetics and mechanism from ab initio metadynamics simulations Kumar, P. Padma Kalinichev, Andrey G. Kirkpatrick, R. James 2007 http://dx.doi.org/10.1063/1.2741552 https://pubs.aip.org/aip/jcp/article-pdf/doi/10.1063/1.2741552/13118933/204315_1_online.pdf en eng AIP Publishing The Journal of Chemical Physics volume 126, issue 20 ISSN 0021-9606 1089-7690 journal-article 2007 craippubl https://doi.org/10.1063/1.2741552 2024-07-25T04:03:49Z A comprehensive metadynamics study of the energetics, stability, conformational changes, and mechanism of dissociation of gas phase carbonic acid, H2CO3, yields significant new insight into these reactions. The equilibrium geometries, vibrational frequencies, and conformer energies calculated using the density functional theory are in good agreement with the previous theoretical predictions. At 315K, the cis-cis conformer has a very short life time and transforms easily to the cis-trans conformer through a change in the OC–O–H dihedral angle. The energy difference between the trans-trans and cis-trans conformers is very small (≈1kcal∕mol), but the trans-trans conformer is resistant to dissociation to carbon dioxide and water. The cis-trans conformer has a relatively short path for one of its hydroxyl groups to accept the proton from the other end of the molecule, resulting in a lower activation barrier for dissociation. Comparison of the free and potential energies of dissociation shows that the entropic contribution to the dissociation energy is less than 10%. The potential energy barrier for dissociation of H2CO3 to CO2 and H2O from the metadynamics calculations is 5–6kcal∕mol lower than in previous 0K studies, possibly due to a combination of a finite temperature and more efficient sampling of the energy landscape in the metadynamics calculations. Gas phase carbonic acid dissociation is triggered by the dehydroxylation of one of the hydroxyl groups, which reorients as it approaches the proton on the other end of the molecule, thus facilitating a favorable H–O–H angle for the formation of a product H2O molecule. The major atomic reorganization of the other part of the molecule is a gradual straightening of the OCO bond. The metadynamics results provide a basis for future simulation of the more challenging carbonic acid-water system. Article in Journal/Newspaper Carbonic acid AIP Publishing The Journal of Chemical Physics 126 20 204315
institution Open Polar
collection AIP Publishing
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language English
description A comprehensive metadynamics study of the energetics, stability, conformational changes, and mechanism of dissociation of gas phase carbonic acid, H2CO3, yields significant new insight into these reactions. The equilibrium geometries, vibrational frequencies, and conformer energies calculated using the density functional theory are in good agreement with the previous theoretical predictions. At 315K, the cis-cis conformer has a very short life time and transforms easily to the cis-trans conformer through a change in the OC–O–H dihedral angle. The energy difference between the trans-trans and cis-trans conformers is very small (≈1kcal∕mol), but the trans-trans conformer is resistant to dissociation to carbon dioxide and water. The cis-trans conformer has a relatively short path for one of its hydroxyl groups to accept the proton from the other end of the molecule, resulting in a lower activation barrier for dissociation. Comparison of the free and potential energies of dissociation shows that the entropic contribution to the dissociation energy is less than 10%. The potential energy barrier for dissociation of H2CO3 to CO2 and H2O from the metadynamics calculations is 5–6kcal∕mol lower than in previous 0K studies, possibly due to a combination of a finite temperature and more efficient sampling of the energy landscape in the metadynamics calculations. Gas phase carbonic acid dissociation is triggered by the dehydroxylation of one of the hydroxyl groups, which reorients as it approaches the proton on the other end of the molecule, thus facilitating a favorable H–O–H angle for the formation of a product H2O molecule. The major atomic reorganization of the other part of the molecule is a gradual straightening of the OCO bond. The metadynamics results provide a basis for future simulation of the more challenging carbonic acid-water system.
format Article in Journal/Newspaper
author Kumar, P. Padma
Kalinichev, Andrey G.
Kirkpatrick, R. James
spellingShingle Kumar, P. Padma
Kalinichev, Andrey G.
Kirkpatrick, R. James
Dissociation of carbonic acid: Gas phase energetics and mechanism from ab initio metadynamics simulations
author_facet Kumar, P. Padma
Kalinichev, Andrey G.
Kirkpatrick, R. James
author_sort Kumar, P. Padma
title Dissociation of carbonic acid: Gas phase energetics and mechanism from ab initio metadynamics simulations
title_short Dissociation of carbonic acid: Gas phase energetics and mechanism from ab initio metadynamics simulations
title_full Dissociation of carbonic acid: Gas phase energetics and mechanism from ab initio metadynamics simulations
title_fullStr Dissociation of carbonic acid: Gas phase energetics and mechanism from ab initio metadynamics simulations
title_full_unstemmed Dissociation of carbonic acid: Gas phase energetics and mechanism from ab initio metadynamics simulations
title_sort dissociation of carbonic acid: gas phase energetics and mechanism from ab initio metadynamics simulations
publisher AIP Publishing
publishDate 2007
url http://dx.doi.org/10.1063/1.2741552
https://pubs.aip.org/aip/jcp/article-pdf/doi/10.1063/1.2741552/13118933/204315_1_online.pdf
genre Carbonic acid
genre_facet Carbonic acid
op_source The Journal of Chemical Physics
volume 126, issue 20
ISSN 0021-9606 1089-7690
op_doi https://doi.org/10.1063/1.2741552
container_title The Journal of Chemical Physics
container_volume 126
container_issue 20
container_start_page 204315
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