Search Results

Out of the Pacific and back again:insights into the matrilineal history of Pacific Killer whale ecotypes

by Foote, Andrew David, Morin, Phillip A., Durban, John W., Willerslev, Eske, Orlando, Ludovic Antoine Alexandre, Gilbert, Tom
Published in PLoS ONE (2011)

Combining bleach and mild predigestion improves ancient DNA recovery from bones

by Boessenkool, Sanne, Hanghøj, Kristian Ebbesen, Nistelberger, Heidi M., Der Sarkissian, Clio, Gondek, Agata T., Orlando, Ludovic Antoine Alexandre, Barrett, James H., Star, Bastiaan
Published in Molecular Ecology Resources (2017)

A comparative study of ancient environmental DNA to pollen and macrofossils from lake sediments reveals taxonomic overlap and additional plant taxa

by Pedersen, M.W., Ginolhac, Aurélien, Orlando, Ludovic Antoine Alexandre, Olsen, J., Andersen, K., Holm, J., Funder, Svend Visby, Willerslev, Eske, Kjær, K.H.
Published in Quaternary Science Reviews (2013)

A comparative study of ancient environmental DNA to pollen and macrofossils from lake sediments reveals taxonomic overlap and additional plant taxa

by Pedersen, Mikkel Winther, Ginolhac, Aurélien, Orlando, Ludovic Antoine Alexandre, Olsen, Jesper, Andersen, Kenneth, Holm, Jakob Mørkøv, Funder, Svend Visby, Willerslev, Eske, Kjær, Kurt H.
Published in Quaternary Science Reviews (2013)

Investigating the potential use of environmental DNA (eDNA) for genetic monitoring of marine mammals

by Foote, Andrew David, Thomsen, Philip Francis, Sveegaard, Signe, Wahlberg, Magnus, Kielgast, Jos, Kyhn, Line A., Salling, Andreas B., Galatius, Anders, Orlando, Ludovic Antoine Alexandre, Gilbert, Tom
Published in PLoS ONE (2012)

Planktonic foraminifera-derived environmental DNA extracted from abyssal sediments preserves patterns of plankton macroecology

by Morard, Raphaël, Lejzerowicz, Franck, Darling, Kate F., Lecroq-Bennet, Béatrice, Pedersen, Mikkel Winther, Orlando, Ludovic Antoine Alexandre, Pawlowski, Jan, Mulitza, Stefan, de Vargas, Colomban, Kucera, Michal
Published in Biogeosciences (2017)

Investigating the Potential Use of Environmental DNA (eDNA) for Genetic Monitoring of Marine Mammals

by Foote, Andrew David, Thomsen, P.F., Sveegaard, Signe, Wahlberg, Magnus, Kielgast, J., Kyhn, Line Anker, Salling, A.B., Galatius, A., Orlando, Ludovic Antoine Alexandre, Gilbert, M.T.P.
Published in PLoS ONE (2012)

Islands in the ice:detecting past vegetation on Greenlandic nunataks using historical records and sedimentary ancient DNA Meta-barcoding

by Jørgensen, Tina, Kjær, Kurt H., Haile, James Seymour, Rasmussen, Morten, Boessenkool, Sanne, Andersen, Kenneth, Coissac, Eric, Taberlet, Pierre, Brochmann, Christian, Orlando, Ludovic Antoine Alexandre, Gilbert, Tom, Willerslev, Eske
Published in Molecular Ecology (2012)

Investigating the Potential Use of Environmental DNA (eDNA) for Genetic Monitoring of Marine Mammals

by Foote, Andrew David, Thomsen, P. F., Sveegaard, Signe, Wahlberg, M., Kielgast, J., Kyhn, Line Anker, Salling, A. B., Galatius, Anders, Orlando, Ludovic Antoine Alexandre, Gilbert, Marcus Thomas Pius
Published in PLoS ONE (2012)

Ancient DNA sequences point to a large loss of mitochondrial genetic diversity in the saiga antelope ( Saiga tatarica ) since the Pleistocene

by Campos, Paula, Kristensen, Tommy, Orlando, Ludovic Antoine Alexandre, Sher, Andrei, Kholodova, Marina V., Götherström, Anders, Hofreiter, Michael, Drucker, Dorothée G., Kosintsev, Pavel, Tikhonov, Alexei, Baryshnikov, Gennady F., Willerslev, Eske, Gilbert, Tom
Published in Molecular Ecology (2010)

A comparative study of ancient sedimentary DNA, pollen and macrofossils from permafrost sediments of northern Siberia reveals long-term vegetational stability

by Jørgensen, Tina, Haile, James Seymour, Möller, Per, Andreev, Andrei, Boessenkool, Sanne, Rasmussen, Morten, Kienast, Frank, Coissac, Eric, Taberlet, Pierre, Brochmann, Christian, Bigelow, Nancy H., Andersen, Kenneth, Orlando, Ludovic Antoine Alexandre, Gilbert, Tom, Willerslev, Eske
Published in Molecular Ecology (2012)

Proteomic analysis of a pleistocene mammoth femur reveals more than one hundred ancient bone proteins

by Cappellini, Enrico, Jensen, Lars Juhl, Szklarczyk, Damian Milosz, Ginolhac, Aurélien, da Fonseca, Rute Andreia Rodrigues, Stafford jr., Thomas, Holen, Steven R., Collins, Matthew J., Orlando, Ludovic Antoine Alexandre, Willerslev, Eske, Gilbert, Tom, Olsen, Jesper Velgaard
Published in Journal of Proteome Research (2012)

The wolf reference genome sequence ( Canis lupus lupus ) and its implications for Canis spp . population genomics

by Gopalakrishnan, Shyam, Samaniego Castruita, Jose Alfredo, Sinding, Mikkel Holger Strander, Kuderna, Lukas F. K., Räikkönen, Jannikke, Petersen, Bent, Sicheritz-Pontén, Thomas, Larson, Greger, Orlando, Ludovic Antoine Alexandre, Marques-Bonet, Tomas, Hansen, Anders Johannes, Dalén, Love, Gilbert, Tom
Published in BMC Genomics (2017)

The wolf reference genome sequence (Canis lupus lupus) and its implications for Canis spp. population genomics

by Gopalakrishnan, Shyam, Samaniego Castruita, Jose Alfredo, Sinding, Mikkel Holger Strander, Kuderna, Lukas F. K., Räikkönen, Jannikke, Petersen, Bent, Sicheritz-Pontén, Thomas, Larson, Greger, Orlando, Ludovic Antoine Alexandre, Marques-Bonet, Tomas, Hansen, Anders Johannes, Dalén, Love, Gilbert, M. Thomas P.
Published in BMC Genomics (2017)

True single-molecule DNA sequencing of a pleistocene horse bone

by Orlando, Ludovic Antoine Alexandre, Ginolhac, Aurélien, Raghavan, Maanasa, Mouatt, Julia Thidamarth Vilstrup, Rasmussen, Morten, Magnussen, Kim, Steinmann, Kathleen E., Kapranov, Philipp, Thompson, John F., Zazula, Grant, Froese, Duane, Moltke, Ida, Shapiro, Beth, Hofreiter, Michael, Al-Rasheid, Khaled A. S., Gilbert, M. Thomas P., Willerslev, Eske
Published in Genome Research (2011)

Postglacial viability and colonization in North America’s ice-free corridor

by Pedersen, Mikkel Winther, Ruter, Anthony Henry, Schweger, Charlie, Friebe, Harvey, Staff, Richard A., Kjeldsen, Kristian Kjellerup, Zepeda Mendoza, Marie Lisandra, Beaudoin, Alwynne B., Zutter, Cynthia, Larsen, Nicolaj Krog, Potter, Ben A., Nielsen, Rasmus, Rainville, Rebecca A., Orlando, Ludovic Antoine Alexandre, Meltzer, David J., Kjær, Kurt H., Willerslev, Eske
Published in Nature (2016)

Ancient DNA analyses exclude humans as the driving force behind late Pleistocene musk ox (Ovibos moschatus) population dynamics

by Campos, Paula, Willerslev, Eske, Sher, Andrei, Orlando, Ludovic Antoine Alexandre, Axelsson, Erik Gunnar, Tikhonov, Alexei, Aaris-Sørensen, Kim, Greenwood, Alex D., Kahlke, Ralf-Dietrich, Kosintsev, Pavel, Krakhmalnaya, Tatiana, Kuznetsova, Tatyana, Lemey, Philippe, MacPhee, Ross, Norris, Christopher A., Shepherd, Kieran, Suchard, Marc A., Zazula, Grant D., Shapiro, Beth, Gilbert, Tom
Published in Proceedings of the National Academy of Sciences (2010)

Ancient and modern environmental DNA

by Pedersen, Mikkel Winther, Overballe-Petersen, Søren, Ermini, Luca, Der Sarkissian, Clio, Haile, James Seymour, Hellström, Ann Micaela, Spens, Johan, Thomsen, Philip Francis, Bohmann, Kristine, Cappellini, Enrico, Schnell, Ida Bærholm, Wales, Nathan, Carøe, Christian, Campos, Paula, Schmidt, Astrid Mariah Zelma, Gilbert, M. Thomas P., Hansen, Anders Johannes, Orlando, Ludovic Antoine Alexandre, Willerslev, Eske
Published in Philosophical Transactions of the Royal Society B: Biological Sciences (2015)

Pros and cons of methylation-based enrichment methods for ancient DNA

by Seguin-Orlando, Andaine, Gamba, Cristina, Der Sarkissian, Clio, Ermini, Luca, Louvel, Guillaume, Boulygina, Eugenia, Sokolov, Alexey, Nedoluzhko, Artem, Lorenzen, Eline, Lopez, Patricio, McDonald, H. Gregory, Scott, Eric, Tikhonov, Alexei, Stafford jr., Thomas, Alfarhan, Ahmed H., Alquraishi, Saleh A., Al-Rasheid, Khaled A. S., Shapiro, Beth, Willerslev, Eske, Prokhortchouk, Egor, Orlando, Ludovic Antoine Alexandre
Published in Scientific Reports (2015)

Genome-wide nucleosome map and cytosine methylation levels of an ancient human genome

by Pedersen, Jakob Skou, Valen, Eivind, Velazquez, Amhed Missael Vargas, Parker, Brian John, Rasmussen, Morten, Lindgreen, Stinus, Lilje, Berit, Tobin, Desmond J., Kelly, Theresa K., Vang, Søren, Andersson, Robin, Jones, Peter A., Hoover, Cindi A., Tikhonov, Alexei, Prokhortchouk, Egor, Rubin, Edward M., Sandelin, Albin Gustav, Gilbert, M. Thomas P., Krogh, Anders, Willerslev, Eske, Orlando, Ludovic Antoine Alexandre
Published in Genome Research (2014)